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Structure of PDB 4v5n Chain BT Binding Site BS01

Receptor Information >4v5n Chain BT (length=137) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] MNRGALIKLVESRYVRTDLPEFRPGDTVRVSYKVKEGNRTRIQDFEGIVI RIRRNGFNTTFTVRKVSYGVGVERIFPLHSPLIQKIDIVQRGRARRAKLY FIRNLSDREIRRKLRADRKRIDQDRAAERAAKEEAQK

Ligand information >4v5n Chain AA (length=1504) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] uggagaguuugauccuggcucagggugaacgcuggcggcgugccuaagac augcaagucgugcgggccgcgggguuuuacuccguggucagcggcggacg ggugaguaacgcgugggugaccuacccggaagagggggacaacccgggga aacucgggcuaaucccccauguggacccgccccuugggguguguccaaag ggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguugguggg guaauggcccaccaaggcgacgacggguagccggucugagaggauggccg gccacaggggcacugagacacgggccccacuccuacgggaggcagcaguu aggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuuggag gaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccga cgaggggacugacgguaccgggguaauagcgccggccaacuccgugccag cagccgcgguaauacggagggcgcgagcguuacccggauucacugggcgu aaagggcguguaggcggccuggggcgucccaugugaaagaccacggcuca accgugggggagcgugggauacgcucaggcuagacggugggagagggugg uggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgccg auggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagcg uggggagcaaaccggauuagauacccggguaguccacgcccuaaacgaug cgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcgc gccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacggg ggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaaga accuuaccaggccuugacaugcuagggaacccgggugaaagccuggggug ccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcucg ugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccguu aguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagcg ggaggaaggaggggacgacgucuggucagcauggcccuuacggccugggc gacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacggg gagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaacccg accccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcggu gaauacguucccgggccuuguacacaccgcccgucacgccaugggagcgg gcucuacccgaagucgccgggagccuacgggcaggcgccgaggguagggc ccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcggc ugga ....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<<< .<<<..<<<..<<.<<<<<<<<.........>>>>>>>>.>>>>>..... .<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<... ...>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..< <<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<< .......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>> >>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>> >........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<< ......<<<<....>>>>.....>>>>....<<<<<........<<<<.. ...>>>>..........>>>>>......<<<<<(((...<<<<<.....< <.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<(( .....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.... .>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<< <....<<<<<<<.<..<<<......>>>.....>.>>>>>>>........ ...<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<< <<<...<<...<<<<.<.....>.>>>>...>>>>>>>>..........< <<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>> >>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<.< <<<<<<.<<.<<<<<<..<<<<<<<<<<......<<........>>.... ......<<<<<<<......<<.<<<<....<.<<<<....>>>>.>.... .<<.....>>.....>>>>.>>.<<<.<<<..<<<<<<<......<<<<< <<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<< <...<<<...<<.....>>.>>>....>>>>>>.....<<<<<....>>> >>........>>>>.......>.>>>...>>>>>>>>>...>>>>>>>.. .>>.>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>> ..>>....>>>.....>>>>>>>......<....<<<<<<<........> >>>>>>....>.....>>>>>>....<<<<<<<..........>>>>>>> ......>>...>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..<<<< <<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>> >>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>>>>> >...

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 4v5n Head Swivel on the Ribosome Facilitates Translocation by Means of Intra-Subunit tRNA Hybrid Sites. Resolution 7.6 Å Binding residue (original residue number in PDB) K35 R41 D107 R108 R111 R118 K119 I121 D122 Binding residue (residue number reindexed from 1) K35 R41 D107 R108 R111 R118 K119 I121 D122

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0003735 structural constituent of ribosome GO:0019843 rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0022625	cytosolic large ribosomal subunit
GO:1990904	ribonucleoprotein complex

View graph for Molecular Function

View graph for Biological Process

View graph for Cellular Component