Content-type: text/html BioLiP

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BioLiP in numbers

BioLiP is updated weekly and the current version (2024-09-28) contains:

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Download all results in tab-seperated text for 1 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • The sequence is converted from residues with experimentally determined coordinates in the structure; residues not observed in the 3D structure are excluded.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (resolution)
    Site
    #
    DNA
    sequence
    EC
    number
    GO
    terms
    UniProt PubMed Binding
    affinity
    1 7t02:A
    (3.8)
    BS01 >7t02:B (identical to 10mh:C, 5ciy:D, 3f8i:E, 3f8i:G, 3f8j:G, 3fde:E, 3fde:F, 1m0e:D, 5mht:D, 6mht:D, 7mht:C, 8mht:C, 9mht:D, 7r77:B)
    gtcagcgcatgg
    3.6.4.- GO:0003677 ... J9VI03 35202575
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    BioLiP in numbers

    BioLiP is updated weekly and the current version (2024-09-28) contains:

    View an example BioLiP entry