Search found 4 matches

by nmrworker
Thu May 27, 2021 3:42 pm
Forum: Main Forum
Topic: output interpretation
Replies: 7
Views: 660

Re: output interpretation

It seems that you would recommend the online version over the stand-alone version since multiple programs are involved to improve the final results, is that right?
by nmrworker
Wed May 26, 2021 3:53 pm
Forum: Main Forum
Topic: output interpretation
Replies: 7
Views: 660

Re: output interpretation

Is that how the online service add protons to the structure? Also the sidechain orientations from the stand-alone version is quite different than the online version. Is that normal?
by nmrworker
Mon May 17, 2021 5:24 pm
Forum: Main Forum
Topic: output interpretation
Replies: 7
Views: 660

Re: output interpretation

the "model1.pdb" generated by stand-alone version has ONLY the amide proton, but the one generated by the online server has all the protons. How to set the stand-alone version to generate all the protons?
by nmrworker
Mon May 10, 2021 4:32 pm
Forum: Main Forum
Topic: output interpretation
Replies: 7
Views: 660

output interpretation

I just installed the stand-alone i-tasser 5.1 on FC 25 and finished the 1st peptide structure prediction. However, I don't know which files to look at, eg, which file corresponds to the "Predicted Secondary Structure", "Top 10 templates used by I-TASSER", "Top 5 Models predi...