Search found 2 matches

by Maytha
Thu Feb 23, 2023 2:13 pm
Forum: Main Forum
Topic: 3DRobot Decoys
Replies: 3
Views: 6385

Re: 3DRobot Decoys

Hello, I apologize for the confusion! My main goal is to generate thousands of decoys with RMSD <=20. I run the 3DRobot package with the parameter: decoys = 1000 and RMSD cutoff = 20 but the number of output decoys that I got is only 433 and their RMSD is <=8A. The main question is why the number of...
by Maytha
Thu Feb 16, 2023 2:11 pm
Forum: Main Forum
Topic: 3DRobot Decoys
Replies: 3
Views: 6385

3DRobot Decoys

Greetings, I downloaded the 3DRobot package to generate decoys with the number of output decoys = 1000 and RMSD cutoff = 20, and the generation of the decoys worked. However, when I checked the output file, I found only 433 decoys with RMSD <=8. I am wondering why the number of output decoys and the...