Search found 4 matches

by chainorato
Thu Jul 15, 2021 7:16 am
Forum: Main Forum
Topic: Can FDpred standalone version work with proteins whose length > 1,500 aa?
Replies: 6
Views: 676

Re: Can FDpred standalone version work with proteins whose length > 1,500 aa?

Hi again, I finally got an e-mail that the job id ITM226 has been finished on the I-TASSER-MDA server. The e-mail stated that I can also see and download the modeling structure of your job in the link it provided. However, I just found the waiting message The protein with name "XXX" (1898 ...
by chainorato
Fri Jun 25, 2021 3:57 am
Forum: Main Forum
Topic: Can FDpred standalone version work with proteins whose length > 1,500 aa?
Replies: 6
Views: 676

Re: Can FDpred standalone version work with proteins whose length > 1,500 aa?

Hi, Could you please check the status of the I-TASSER-MDA job ITM226 for me?
The waiting panel stated that "it will take about 72 hours to complete (job submitted at: Sun Jun 20 03:07:50 EDT 2021)", but there is still nothing in return.
by chainorato
Sun Jun 20, 2021 10:52 am
Forum: Main Forum
Topic: Can FDpred standalone version work with proteins whose length > 1,500 aa?
Replies: 6
Views: 676

Re: Can FDpred standalone version work with proteins whose length > 1,500 aa?

Thank you very much for your prompt response!
I've submitted it through I-TASSER-MDA and it works.
by chainorato
Sun Jun 20, 2021 3:35 am
Forum: Main Forum
Topic: Can FDpred standalone version work with proteins whose length > 1,500 aa?
Replies: 6
Views: 676

Can FDpred standalone version work with proteins whose length > 1,500 aa?

Hi, I have a protein whose length > 1,500 aa that I want to predict a 3D structure. So I used the online ThreaDomEx to predict the protein boundary before submitting it to DEMO. However, it seems ThreaDomEx does not work anymore. I found that FDpred on the online server cannot be used for proteins w...