Search found 3 matches

by mito1983
Sun Nov 07, 2021 2:57 pm
Forum: Main Forum
Topic: Missing files in the COFACTOR EC library
Replies: 4
Views: 1661

Re: Missing files in the COFACTOR EC library

This new library file works perfectly. Thanks very much! I also ran the standalone version of MetaGO, and got the following error message: run GOfreq and PPI2GO /home/xiaofan/analysis/genome/tools/MetaGO/bin/GOfreq/run_GOfreq.py /home/xiaofan/analysis/genome/tools/MetaGO/P69212/config.py /home/xiaof...
by mito1983
Fri Nov 05, 2021 2:47 pm
Forum: Main Forum
Topic: Missing files in the COFACTOR EC library
Replies: 4
Views: 1661

Re: Missing files in the COFACTOR EC library

Thanks for your reply! I still have two questions: 1. the link you provided points to the same library file I have, which does not contain these missing proteins. 2. besides the missing files, I also have the following errors, could you take a look? Cant find /tmp/xiaofan/CF_P69212_523712/JSD_3lomA/...
by mito1983
Thu Nov 04, 2021 2:34 pm
Forum: Main Forum
Topic: Missing files in the COFACTOR EC library
Replies: 4
Views: 1661

Missing files in the COFACTOR EC library

Hi, I was running the standalone COFACTOR and got errors on files missing in the Enzyme library (and additional errors afterward, not sure if they were related to the missing files). The library was downloaded using the "download_lib.pl" script and the "Enzyme" folder has 3,655 p...