Search found 251 matches

by jlspzw
Sat Mar 30, 2024 2:07 pm
Forum: Main Forum
Topic: Concerns Regarding Delays with DMFold Protein-Protein Interaction Prediction Server
Replies: 4
Views: 65036

Re: Concerns Regarding Delays with DMFold Protein-Protein Interaction Prediction Server

Dear user, We are currently suffering a large number of jobs submitted from the user community, which makes our server job delayed than expected. Please let us know your job ID or email used for submission. We are trying to process the server jobs and make them faster; it may take a couple of days. ...
by jlspzw
Wed Mar 27, 2024 8:27 am
Forum: Main Forum
Topic: dont get results from DeepMSA2
Replies: 1
Views: 60045

Re: dont get results from DeepMSA2

Dear user,

We have recently received a large number of jobs submitted to our server, so your job may take longer than expected. Your job is running now; we hope it can be completed in the next three days.

Best Regards
Wei Zheng
by jlspzw
Wed Mar 27, 2024 8:11 am
Forum: Main Forum
Topic: runtime error in DeepMSA 2.1
Replies: 1
Views: 60298

Re: runtime error in DeepMSA 2.1

Dear yang,

Please check if the memory you requested is enough or not.

Best Regards
Wei Zheng
by jlspzw
Sun Mar 24, 2024 3:30 am
Forum: Main Forum
Topic: what do output colors indicate
Replies: 3
Views: 63961

Re: what do output colors indicate

Dear Maria,

In this case, Jsmol colors the structure from N (blue) to C (red) terminus with a rainbow scale.

Best Regards
Wei Zheng
by jlspzw
Fri Mar 22, 2024 4:48 pm
Forum: Main Forum
Topic: There may be a code error in DMFold's MSA_combination.py
Replies: 1
Views: 59284

Re: There may be a code error in DMFold's MSA_combination.py

Dear Gary,

Thank you for the bug reporting. Yes, it is a typo bug in the code. We have fixed this issue and released new version of DMFold and DeepMSA2 packages.

https://zhanggroup.org/DMFold/download/
https://zhanggroup.org/DeepMSA2/download/

Best Regards
Wei Zheng
by jlspzw
Fri Mar 22, 2024 4:21 pm
Forum: Main Forum
Topic: what do output colors indicate
Replies: 3
Views: 63961

Re: what do output colors indicate

Hi Maria,

What server did you use?

Best Regards
Wei Zheng
by jlspzw
Fri Mar 22, 2024 4:20 pm
Forum: Main Forum
Topic: DeepMSA2 running issue
Replies: 2
Views: 60663

Re: DeepMSA2 running issue

Dear user,

Your job is ready now.

Best Regards
Wei Zheng
by jlspzw
Wed Mar 20, 2024 1:51 am
Forum: Main Forum
Topic: not getting email from DMFold
Replies: 3
Views: 56072

Re: not getting email from DMFold

Hi Wyzin

You can access your job by https://zhanggroup.org/DMFold/output/DMF482643047 as one example,

Best Regards
Wei Zheng
by jlspzw
Tue Mar 19, 2024 11:44 am
Forum: Main Forum
Topic: not getting email from DMFold
Replies: 3
Views: 56072

Re: not getting email from DMFold

Dear user, Your job IDs are DMF482643047 and DMF349023445. BTW, we found some users' emails could not receive our email for unknown reasons (I also have this issue with one of my Gmail..., but not with other one, it should be issue on email side), so I would suggest you change to another email next ...
by jlspzw
Fri Mar 15, 2024 2:55 am
Forum: Main Forum
Topic: i tasser results not received
Replies: 1
Views: 53125

Re: i tasser results not received

Dear user,

Your job is ready at https://zhanggroup.org/I-TASSER/output/S769904/; our server has been overloaded recently, so the jobs may take longer time than usual.

Thank you

Best Regards
Wei Zheng