Zhanglab forum

Dear user,

Please let us know your job ids of QUARK and C-QUARK. if possible, also give us the email you used for submitting jobs.

Best
IT Team

Dear use,

We support you using a specific template, however, is not sported with fixing specific residues.

Best
IT team

Dear user,

The IT team has saw your request, and you should able to re-submit.

Best
IT Team

Dear user,

We didn't see any sequence in the data folder you provided, so could you first try to re-submit the sequence?

If you have an issue with re-submission, you can send the email with your former jobid to yangzhanglab@umich.edu

Best
IT Team

Dear user,

Based on our experience, edock will take hours to days, depending on the system.

Best
IT Team

BTW, we have new generation I-TASSER software that will be released soon, and we are now testing the issues. if you are interested in it, you can find it at https://zhanggroup.org/D-I-TASSER/download.html. we would appreciate that if you find any issues or give us any feedback.

Best
IT Team

Dear user,

Thanking for sharing your wonderful work. This will save a lot of other users working time. Greatly appreciate it!

Best
IT Team

Dear user, There are three sections on the COTH results page, 1 your input sequences 2 Top ten complex template alignments. Where each item has a detailed explanation at the bottom of this section. 3 COTH recombination models of the tertiary template with a quaternary framework. Let us know if you s...

Dear user,

you can change $dbname ="$libdir/nr/nr.filter"; to $dbname ="$libdir/nr/nr";


Best
IT team

Dear user, In mkseq.pl you need change the first serval lines $libdir ="$path"; #####Chainge to specify path $dbname ="$libdir/nr/nr.filter"; # The name of the BLAST data bank $ncbidir="$libdir/blast/bin"; # Where the NCBI legacy blast programs have been installed $exec...