Zhanglab forum

Dear user, We doubt the I-TASSER package is not correctly set. Can you first go to /share/home/cau_wangsw/software/ROSETTA/ITASSER/I-TASSER5.1, to check if the I-TASSER setting is correct? You can first check the README file in I-TASSER5.1 and run the example in I-TASSER5.1 with the main program at ...

Dear user, ResQ download and usage can be found here https://zhanggroup.org/ResQ/download/ Let me know if you followed that instruction or not? If you follow that instruction, is that error come from 2) runResQ.pl? Please attach all the error messages if possible. Also, I would suggest you first mak...

Dear user,

your job has been completed at https://zhanggroup.org/COACH/output/CH2099410050/

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IT team

Dear user,

We are checking your job now and will send you a notification ASAP. Thank you.

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IT team

Dear user, If you know the second protein that you want to check if it will bind to your target sequence, you can try any of the following https://zhanggroup.org/spring/ https://zhanggroup.org/COTH/ https://zhanggroup.org/Threpp/ https://zhanggroup.org/PEPPI/ if you do not know the potentially secon...

Dear user,

The BLAST package in I-TASSER standalone is from NCBI, so you can go to this link to download the source code, https://ftp.ncbi.nlm.nih.gov/blast/exec ... ED/2.2.26/

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IT team

Dear user, Unfortunately, we didn't separate the RNA and DNA. But after you download the BioLip, you can find the pdb id for each entry. First, check the ligand ID NUC, then go to PDB and download the pdb/fasta based on pdb id for each entry. check the NUC ligand sequence. If the sequence contains '...

Dear user,

you job has been completed https://zhanggroup.org/COACH/output/CH2099409567/

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IT team

Dear user, For 1, Yes, you are correct For 2, You may first download the entire BioLip and count them separately For 3, Unfortunately, you can only download the entire BioLip, which actually is not that large. For 4, Ligand ID: This can be the standard 3-letter code of ligand from PDB and MMCIF file...

Dear user, Thank you for using our server. We found there are some communication issues between the job submitting server and the job running server, we are fixing the issue now. Please wait 1-2 days to see if the results come, we will monitor your job running and give you updates when it is complet...