Alignment based on pLDDT
Posted: Mon Mar 18, 2024 4:56 pm
To whom it may concern,
I have read: viewtopic.php?f=3&t=652&p=1220&hilit=pl ... fe7c#p1220
Does US-Align take into account pLDDT and BAT scores for AlphaFold and PDB crystal structures? Both are residue location confidence metrics. I believe this could enhance the tool and be implemented using the summation of relative weights of the aligned residues.
Best wishes,
Antonia
I have read: viewtopic.php?f=3&t=652&p=1220&hilit=pl ... fe7c#p1220
Does US-Align take into account pLDDT and BAT scores for AlphaFold and PDB crystal structures? Both are residue location confidence metrics. I believe this could enhance the tool and be implemented using the summation of relative weights of the aligned residues.
Best wishes,
Antonia