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DeepMSA2 and DMFold questions about

Posted: Thu Apr 11, 2024 9:19 am
by make110980006
Why DeepMSA2 file's didn't have aMSA generate code yet the readme mentioned that it will output aMSA.*a3m/aln, dMSA.*a3m/aln, and qMSA.*a3m/aln. Also without the result, it will not get into the next step to run

Re: DeepMSA2 and DMFold questions about

Posted: Fri Apr 12, 2024 3:57 pm
by jlspzw
Dear user,

DeepMSA2 doesn't contains aMSA, the readme file has some typo, we will delete it from readme. does not require aMSA. qMSA and dMSA is enough for next step. if you only have qMSA.hhb* dMSA.hhb* and do not have d/qMSA.jac* and others, will tell you no need to do IMG search.

Let us know if you have any question.

Best Regards
Wei Zheng