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BioLip data

Posted: Tue Sep 17, 2024 7:33 pm
by asnascimento
I wonder if is there any attempt to provide the interaction data available in BioLip as text for download.

More specifically, I would be super interested in a dataset with protein sequence and peptide sequence (for each interacting protein-peptide). Protein (sequence) and ligand (SMILES) would also be super interesting.

Is there anything in this context?

Best,

Alessandro

Re: BioLip data

Posted: Wed Oct 09, 2024 1:59 am
by zcx@umich.edu
You may check https://zhanggroup.org/BioLiP/download.html
which contains "BioLiP.txt.gz".