Re: C-I-Tasser Standalone Installation Help Request
Posted: Thu Apr 20, 2023 6:46 pm
Is it possible for you to provide the correct versions to use for the python dependencies required for the standalone version? Also, what are the settings that the server runs in the bash script? I am interested in this for I-Tasser and C-I-Tasser.
for example:
perl runI-TASSER.pl -pkgdir ./C-I-TASSER-1.0 -libdir ./CIT_Lib -seqname example.fasta -datadir ./data_dir -outdir ./out_dir -runstyle parallel -homoflag benchmark -idcut 0.3 -light true -nmodel 5 -hours 5 -LBS false -EC false -GO false -java_home /usr -cit true;
This would help so much!
Thanks,
Rich
for example:
perl runI-TASSER.pl -pkgdir ./C-I-TASSER-1.0 -libdir ./CIT_Lib -seqname example.fasta -datadir ./data_dir -outdir ./out_dir -runstyle parallel -homoflag benchmark -idcut 0.3 -light true -nmodel 5 -hours 5 -LBS false -EC false -GO false -java_home /usr -cit true;
This would help so much!
Thanks,
Rich