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Regarding the second iteration of the TASSER program in the I-TASSER standalone

Posted: Thu May 19, 2022 1:40 pm
by rupesh
Hello,
My query is regarding the downloadable version of I-TASSER. As the name states, a second iteration of TASSER is performed right after the clustering step. While going through the script runI-TASSER.pl, I failed to find the exact location where the second iteration is executed. I am curious to know the answer and I'll be grateful if you can indulge my curiosity.

Re: Regarding the second iteration of the TASSER program in the I-TASSER standalone

Posted: Sat May 21, 2022 3:45 pm
by zcx@umich.edu
The second round of simulation is performed by I-TASSERmod/EMrefinement.pl which is called by line 1915 of I-TASSERmod/runI-TASSER.pl

Re: Regarding the second iteration of the TASSER program in the I-TASSER standalone

Posted: Sun May 22, 2022 4:43 pm
by rupesh
Thank you so much!