Query to maximum input in PEPPI

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Query to maximum input in PEPPI

Post by ichenjellyli »

Dear PEPPI team,

I would like to express my gratitude to the Zhang Lab for creating the remarkable PEPPI, which is both user-friendly and powerful. However, I have encountered an issue while attempting to predict an interaction involving a protein called "lp_1303a family serine-rich repeat glycoprotein adhesin," which has 3110 residues. I noticed that the maximum input allowed by PEPPI is only 1500 residues.

I am curious if PEPPI will support longer residue inputs in the future. Thank you for your attention to this matter.

Best regards,
Posts: 40
Joined: Wed Nov 03, 2021 5:59 pm

Re: Query to maximum input in PEPPI

Post by zcx@umich.edu »

If you have to handle longer sequence, you will need to download and install PEPPI from https://github.com/ewbell94/PEPPI and run it on your own computer.
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