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Post by Iki_2019 »


When i read the the MMalign paper it's provide an option to optimize the interface match in addition to optimizing the TM-score.
However i’m not sure that i got the option in the help ?

Could you please tell me how can i use it?

Thank you
Posts: 139
Joined: Sun Apr 25, 2021 12:02 am

Re: MMalign_interface

Post by xiaogenz »

I have checked the source code and found that the program may automatically optimize the alignment of the interface residues because there is a part to identify the interface region.
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