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LS-align RESULTS PAGE

Name of Query Ligand:   HN3_A_1049_tran
Name of Template Ligand:   2SK_A_5009
Atom Number of Query Ligand:  46
Atom Number of Template Ligand:  38

Rigid LS-align Results
  • PC-score:
    PC-score = 0.5078      P-value = 0.061482 (if normalized by atom number of Query Ligand)
    PC-score = 0.6207      P-value = 0.010690 (if normalized by atom number of Template Ligand)
    (You should use PC-score normalized by the atom number of the reference ligand)
  • Jaccard Ratio:    0.2903
  • RMSDLS:    9.7226
  • Alignment Information:
    (":" denotes aligned atom pairs of d < 1.0 A, "." denotes other aligned atoms)
    Query Atom Index:         1    2    4    5    8    9   16   19   21
    Query Atom Type:         O    O    O    N    C    C    C    C    C
    Aligned Tag:         :    :    :    :    :    :    :    :    :
    Templ Atom Type:         O    O    O    C    C    N    C    C    C
    Templ Atom Index:         2    4    3   13    7    5   14   15   17
Visualization (Query ligand in yellow and template ligand in red)
Rigid alignment (Download the rigid superposition)

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