Zhanglab forum

Hello Zhang, I once again turn to you for some clarification. I have been playing around with the dataset and I ran into a situation. The main file "BioLiP.txt.gz" has about 800.000+ entries (redundant set), all kinds of ligands included. When downloading the weekly updates (redundant set)...

Our system was in maintenance last week. You can resubmit your job now. Sorry for the inconvenience.

Our system experienced maintenance last week and we apologize for the inconvenience. Your job should have been completed now since our system was back.

It should work now. Sorry for the inconvenience.

I did not find problem for running COFACTOR server. Please specify why you think "it doesn't seem to work".

We do not currently have a standalone version for COFACTOR. However, you can install the I-TASSER package, where COFACTOR is one component of the package.

You may read the webpage at:
https://zhanggroup.org/I-TASSER/annotation/

you can download and run HAAD program (https://zhanglab.ccmb.med.umich.edu/HAAD/) to add all protons. It is very simple and fast.

Welcome to the new forum. Happy prediction!

-The I-TASSER Team