Search found 43 matches
- Sat Jan 21, 2023 2:31 am
- Forum: Main Forum
- Topic: Speed up DeepFold by multiple cpu usage?
- Replies: 1
- Views: 15074
Re: Speed up DeepFold by multiple cpu usage?
It will speed up the MSA generation time mainly, which is usually the slowest step during modeling.
- Tue Jan 04, 2022 12:51 am
- Forum: Main Forum
- Topic: Evo Design Interface Design
- Replies: 1
- Views: 2957
Re: Evo Design Interface Design
We apologize for the delays. We are currently working on repairing the server and hope to return your results asap!
- Thu Oct 21, 2021 6:38 pm
- Forum: Main Forum
- Topic: Unable to login to download I-TASSER Suite
- Replies: 2
- Views: 3156
Re: Unable to login to download I-TASSER Suite
You may try to reset your password again, as the email submission should be working. If not, you may email me at robpearc@umich.edu and I will follow up again.
- Sun Aug 08, 2021 4:25 pm
- Forum: Main Forum
- Topic: Threading Template
- Replies: 1
- Views: 4518
Re: Threading Template
I-TASSER only currently supports uploading one specified template. Although the coverage of our template library is quite extensive, so the specified PDB or a structurally similar one will most likely already be included in the library.
- Sun Aug 08, 2021 4:07 pm
- Forum: Main Forum
- Topic: ResQ result doesn't show up
- Replies: 1
- Views: 6143
Re: ResQ result doesn't show up
Your results should be available at https://zhanggroup.org/ResQ/output/R000913/.
- Thu Jul 22, 2021 7:27 pm
- Forum: Main Forum
- Topic: job S629837
- Replies: 1
- Views: 5965
Re: job S629837
We apologize for the delay! Your results are available at https://zhanggroup.org/I-TASSER/output/S629837/.
- Thu Jul 22, 2021 7:24 pm
- Forum: Main Forum
- Topic: Job not yet received
- Replies: 1
- Views: 4076
Re: Job not yet received
We are currently catching up on previous jobs, which have been delayed due to a high number of jobs for a related project. Your job should be completed in the order that it was received.
Thanks!
Thanks!
- Wed Jul 21, 2021 4:41 am
- Forum: Main Forum
- Topic: Getting information about model ranked 2 i-Tasser
- Replies: 3
- Views: 6920
Re: Getting information about model ranked 2 i-Tasser
The different models are generated by clustering all of the conformations produced during the folding simulations, so the templates identified for model 1 should be identical to those identified for models 2, 3, 4 etc. The other information, such as the biological function prediction may be obtained...
- Fri Jul 16, 2021 8:01 am
- Forum: Main Forum
- Topic: How to explain the predicted 3D structures
- Replies: 3
- Views: 5099
Re: How to explain the predicted 3D structures
I'm not quite sure I understand your question. Would you be able to provide some more information on what you mean? It looks like the two sequences are different and produce different modeling results, although they share several regions with high similarity as the sequences are similar.
Thanks!
Thanks!
- Fri Jul 16, 2021 7:55 am
- Forum: Main Forum
- Topic: Error during SPRINGDB instalaltion
- Replies: 1
- Views: 5113
Re: Error during SPRINGDB instalaltion
This may be an issue with f2py. Have you tried compiling the program using gfortran -static -O3 -ffast-math -lm -o NWalign NWalign.f or g77 -static -O3 -lm -o NWalign NWalign.f, which is recommended for compilation?