Search found 221 matches

by jlspzw
Sat Feb 24, 2024 1:38 pm
Forum: Main Forum
Topic: How to obtain protein complex pdb with DMFold?
Replies: 1
Views: 6

Re: How to obtain protein complex pdb with DMFold?

Dear user,

If you want to get the complex structure, please download the DMFold package instead of DeepMSA2.

https://zhanggroup.org/DMFold/

Best Regards
Wei Zheng
by jlspzw
Fri Feb 23, 2024 4:52 am
Forum: Main Forum
Topic: Multiple sequences
Replies: 1
Views: 22

Re: Multiple sequences

Dear user, We do not accept multiple submissions at one time, and since we have a lot of users and limited resources, to serve more, we limit one job/user. If you want to run more, you can download our standalone package. Let us know if you have any other questions, or if you need any help. Best Reg...
by jlspzw
Fri Feb 23, 2024 4:48 am
Forum: Main Forum
Topic: I-TASSER standalone suite installation
Replies: 7
Views: 66

Re: I-TASSER standalone suite installation

Dear Righteous,

This is the available link https://zhanggroup.org/library/nr.tar.gz you can manually click and download.

Best Regrads
Wei Zheng
by jlspzw
Mon Feb 19, 2024 8:37 pm
Forum: Main Forum
Topic: I-TASSER standalone suite installation
Replies: 7
Views: 66

Re: I-TASSER standalone suite installation

Dear Righteous,

How about this one https://zhanggroup.org/library/nr.tar.gz

Best Regards
Wei Zheng
by jlspzw
Mon Feb 19, 2024 6:23 pm
Forum: Main Forum
Topic: I-TASSER standalone suite installation
Replies: 7
Views: 66

Re: I-TASSER standalone suite installation

Hi Righteous,

Please change the line 102 in the download_lib.pl, the link from ftp://zhanglab.ccmb.med.umich.edu/download/nr.tar.gz to ftp://zhanglab.ccmb.med.umich.edu/library/nr.tar.gz , see if the new one works.

Best Regards
Wei Zheng
by jlspzw
Mon Feb 19, 2024 3:16 am
Forum: Main Forum
Topic: I-TASSER standalone suite installation
Replies: 7
Views: 66

Re: I-TASSER standalone suite installation

Dear user,

could you post your download_lib.pl as an attached file?

Thank you.

Best Regards
Wei Zheng
by jlspzw
Sun Feb 11, 2024 10:12 pm
Forum: Main Forum
Topic: Huge delay
Replies: 1
Views: 75

Re: Huge delay

Dear user,

We had a weekly library update issue last week, so we are fixing the server issue now, it seems your job also be affected by this library issue. We hope this issue can be solved in next week. Thank you.

Best
IT Team
by jlspzw
Sat Feb 10, 2024 9:18 pm
Forum: Main Forum
Topic: DMFold, DeepMSA2 and I-TASSER-based methods updates
Replies: 1
Views: 66

DMFold, DeepMSA2 and I-TASSER-based methods updates

Dear user, We have released a new version of DMFold (v1.1) and DeepMSA2 (v2.1) that fix several small issues. you can download them from https://zhanggroup.org/DMFold/ https://zhanggroup.org/DeepMSA2/ We also found a library update issue on Feb 2, so if you downloaded the I-TASSER series standalone ...
by jlspzw
Sat Feb 10, 2024 9:15 pm
Forum: Main Forum
Topic: java.lang.NumberFormatException: For input string: -NAN
Replies: 3
Views: 70

Re: java.lang.NumberFormatException: For input string: -NAN

Dear user, It may be caused by library issues, We found a library update issue on Feb 2, if you downloaded the I-TASSER series standalone packages (I-TASSER, C-I-TASSER, D-I-TASSER, C-QUARK, etc) after Feb 2, please remove the summary* MTX and PDB folders in ITlib folder and re-download the library ...