Modelling trimers

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Moderator: robpearc

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Joined: Tue Nov 02, 2021 2:59 pm

Modelling trimers

Post by Andromada »

Hello there!

Is there a way to guide your program to model a trimer instead of a "monomer"?
I have a 553 AA long protein which is assembled in a trimer. Obviously when I model it as a monomer it won't bear any usable results.
Any suggestion?

Thank you
Posts: 139
Joined: Sun Apr 25, 2021 12:02 am

Re: Modelling trimers

Post by xiaogenz »

Currently, we just have a method for dimer modeling ( You can try to use Rosetta symmetry docking. You can also use Modeller if you have good trimer templates.
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