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Structure of PDB 6ucq Chain 1b Binding Site BS01

Receptor Information >6ucq Chain 1b (length=231) Species: 300852 (Thermus thermophilus HB8) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] VKELLEAGVHFGHERKRWNPKFARYIYAERNGIHIIDLQKTMEELERTFR FIEDLAMRGGTILFVGTKKQAQDIVRMEAERAGMPYVNQRWLGGMLTNFK TISQRVHRLEELEALFASPEIEERPKKEQVRLKHELERLQKYLSGFRLLK RLPDAIFVVDPTKEAIAVREARKLFIPVIALADTDSDPDLVDYIIPGNDD AIRSIQLILSRAVDLIIQARGGVVEPSPSYA

Ligand information >6ucq Chain 1a (length=1499) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] uuggagaguuugauccuggcucagggugaacgcuggcggcgugccuaaga caugcaagucgugcgggccgcggguccguggucagcggcggacgggugag uaacgcgugggugaccuacccggaagagggggacaacccggggaaacucg ggcuaaucccccauguggacccgccccuugggguguguccaaagggcuuu gcccgcuuccggaugggcccgcgucccaucagcuaguuggugggguaaug gcccaccaaggcgacgacggguagccggucugagaggauggccggccaca ggggcacugagacacgggccccacuccuacgggaggcagcaguuaggaau cuuccgcaaugggcgcaagccugacggagcgacgccgcuuggaggaagaa gcccuucgggguguaaacuccugaacccgggacgaaacccccgacgaggg gacugacgguaccgggguaauagcgccggccaacuccgugccagcagccg cgguaauacggagggcgcgagcguuacccggauucacugggcguaaaggg cguguaggcggccuggggcgucccaugugaaagaccacggcucaaccgug ggggagcgugggauacgcucaggcuagacggugggagagggugguggaau ucccggaguagcggugaaaugcgcagauaccgggaggaacgccgauggcg aaggcagccaccugguccacccgugacgcugaggcgcgaaagcgugggga gcaaaccggauuagauacccggguagucccgcccuaaacgaugcgcgcua ggucucugggucuccugggggccgaagcuaacgcguuaagcgcgccgccu ggggaguacggccgcaaggcugaaacucaaaggaauugacgggggcccgc acaagcgguggagcaugugguuuaauucgaagcaacgcgaagaaccuuac caggccuugacaugcuagggaacccgggugaaagccuggggugccccgcg aggggagcccuagcacaggugcugcauggccgucgucagcucgugccgug agguguuggguuaagucccgcaacgagcgcaacccccgccguuaguugcc agcgguucggccgggcacucuaacgggacugcccgcgaaagcgggaggaa ggaggggacgacgucuggucagcauggcccuuacggccugggcgacacac gugcuacaaugcccacuacaaagcgaugccacccggcaacggggagcuaa ucgcaaaaaggugggcccaguucggauuggggucugcaacccgaccccau gaagccggaaucgcuaguaaucgcggaucagccaugccgcggugaauacg uucccgggccuuguacacaccgcccgucacgccaugggagcgggcucuac ccgaagucgccgggagccuacgggcaggcgccgaggguagggcccgugac uggggcgaagucguaacaagguagcuguaccggaaggugcggcuggauc .....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<< <.<<<..<<<..<<.<<<<<<<<..>>>>>>>>.>>>>>......<<... ....<<<<<<<<..<<...<<<<<<<.<<<<<...<<<<<<......>>> >>.>...>>>>>...<<<<<.<<<<<....>>>>>.>>>>>..<<<<... >>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<<<...... .>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...>>>>.>>. <<<<<.<.........>>>>>>.<<<<....>>>>...>>>>>>>..... ...<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<<<...... <<<<....>>>>.....>>>>....<<<<<........<<<<.....>>> >..........>>>>>......<<<<<(((...<<<<<.....<<.)))> >.......>>>>>>>>>>..>>>>>>>>>..........<<<((.....< <<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<.....>>>>> >....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<<<<....< <<<<<<.<..<<<......>>>.....>.>>>>>>>...........<<. ...>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<<<.<<... <<...<<<<.<.....>.>>>>...>>>>>>>..........<<<<<<.. <<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>>>>>.>>>. <<<......<<<<....>>>>....>>>..)))).]<<<<<.<<<<<<<. <<.<<<<<<..<<<<<<<<<<......<<........>>..........< <<<<<<......<<<<<<<...<<<<<<<....>>>>>>>...<<<.... ..>>>...>>>>>>>.<<<.<<<..<<<<<<.......<<<<<<<<<... .>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<<<<<..<<< ..<<<.....>>>>>>...>>>>>>>.....<<<<<....>>>>>..... ...>>>>.........>>>...>>>>>>>>>...>>>>>>>...>>.>>> >>>>>.....<<<<<<<.....<<<..<<..<<<<....>>>>..>>... .>>>.....>>>>>>>......<....<<<<<<<........>>>>>>>. ...>.....>>>>>>....<<<<<<<..........>>>>>>>......> >...>>>>>>>>>>.>>.......<<.<.<<<<.<<<..<<<<<<<<<<< <<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>>>>>>>..> >>.>>>>..>.>>.........<<<<<<<<<....>>>>>>>>>.....

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 6ucq Structural basis for ribosome recycling by RRF and tRNA. Resolution 3.5 Å Binding residue (original residue number in PDB) P26 R96 L98 G99 G100 T103 N104 I108 R111 K133 R144 I172 E176 K179 Binding residue (residue number reindexed from 1) P20 R90 L92 G93 G94 T97 N98 I102 R105 K127 R138 I166 E170 K173

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0003735 structural constituent of ribosome GO:0019843 rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

View graph for Molecular Function

View graph for Biological Process

View graph for Cellular Component