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BioLiP

Structure of PDB 4wnl Chain A Binding Site BS01

Receptor Information
>4wnl Chain A (length=227) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DIKVTPGTSELVEQILALLSRYLSSYIHVLNKFISHLRRVATLRFERTTL
IKFVKKLRFYNDSVLSYNASEFINEPGADSFDKVILPIASMFVKCVETFD
LLNYYLTQSLQKEILSKTLNEDLTLTAESILAIDDTYNHFVKFSQWMIES
LRIGSNLLDLEVVQFAIKSADEDGTNIGETDNIFLQEILPVNSEEEFQTL
SAAWHSILDGKLGALDEEFDVVATKWH
Ligand information
>4wnl Chain H (length=6) Species: 545124 (Saccharomyces cerevisiae AWRI1631) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
VLPGVK
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB4wnl Hooking She3p onto She2p for myosin-mediated cytoplasmic mRNA transport.
Resolution2.8 Å
Binding residue
(original residue number in PDB)
W157 E190 Q197 E198 I199 L211 W215 I218
Binding residue
(residue number reindexed from 1)
W146 E179 Q186 E187 I188 L200 W204 I207
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003729 mRNA binding
GO:0005515 protein binding
GO:0008289 lipid binding
GO:1990825 sequence-specific mRNA binding
Biological Process
GO:0007533 mating type switching
GO:0008298 intracellular mRNA localization
GO:0051028 mRNA transport
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0005934 cellular bud tip

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:4wnl, PDBe:4wnl, PDBj:4wnl
PDBsum4wnl
PubMed25535369
UniProtP36068|SHE2_YEAST SWI5-dependent HO expression protein 2 (Gene Name=SHE2)

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