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Structure of PDB 7o81 Chain Ay Binding Site BS01

Receptor Information >7o81 Chain Ay (length=73) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] KLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELL SKGLIKLVSKHRAQVIYTRNTKG

Ligand information >7o81 Chain A2 (length=1770) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] uaccugguugauccugccaguagcauaugcuugucucaaagauuaagcca ugcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucau uaaaucaguuaugguuccuuuggucgcucguacuuggauaacugugguaa uucuagagcuaauacaugccgacgggcgcugacccccuucgcggggggga ugcgugcauuuaucagaucaaaaccaacccggugccggcggcuuugguga cucuagauaaccucgggccgaucgcacgcccuccguggcggcgacgaccc auucgaacgucugcccuaucaacuuucgaugguagucgccgugccuacca uggugaccacgggugacggggaaucaggguucgauuccggagagggagcc ugagaaacggcuaccacauccaaggaaggcagcaggcgcgcaaauuaccc acucccgacccggggagguagugacgaaaaauaacaauacaggacucuuu cgaggcccuguaauuggaaugaguccacuuuaaauccuuuaacgaggauc cauuggagggcaagucuggugccagcagccgcgguaauuccagcuccaau agcguauauuaaaguugcugcaguuaaaaagcucguaguuggaucuuggg agcgggcggccgcccguccccgccucucggcgccccggggcccgaagcgu uuacuuugaaaaaauuagaguguucaaagcaggcccgagccgccuggaua ccgcagcuaggaauaauggaauaggaccgcgguucuauuuuguugguuuu cggaacugaggccaugauuaagagggacggccgggggcauucguauugcg ccgcuagaggugaaauucuuggaccggcgcaagacggaccagagcgaaag cauuugccaagaauguuuucauuaaucaagaacgaaagucggagguucga agacgaucagauaccgucguaguuccgaccauaaacgaugccgacuggcg augcggcggcguuauucccaugacccgccgggcagcuuccgggaaaccaa agucuuuggguuccggggggaguaugguugcaaagcugaaacuuaaagga auugacggaagggcaccaccaggaguggagccugcggcuuaauuugacuc aacacgggaaaccucacccggcccggacacggacaggauugacagauuga uagcucuuucucgauuccgugggugguggugcauggccguucuuaguugg uggagcgauuugucugguuaauuccgauaacgaacgagacucuggcaugc uaacuaguuacgcgacccccgagcggucggcgucccccaacuucuuagag ggacaaguggcguucagccacccgagauugagcaauaacaggucugugau gcccuuagauguccggggcugcacgcgcgcuacacugacuggcucagcgu gugccuacccuacgccggcaggcgcggguaacccguugaaccccauucgu gauggggaucggggauugcaauuauuccccaugaacgaggaauucccagu aagugcgggucauaagcuugcguugauuaagucccugcccuuuguacaca ccgcccgucgcuacuaccgauuggaugguuuagugaggcccucggaucgg ccccgccggggucggcccacggcccuggcggagcgcugagaagacggucg aacuugacuaucuagaggaaguaaaagucguaacaagguuuccguaggug aaccugcggaaggaucauua ...<<<<<...[[[[>>>>>[[[.((((((.....{{.........[[[. [[[..<<....<<....<<..........>>...>>.>>......{{... .....[[[......{{....[[[[[.........<<.....<<.<<.... ...>>.>>......>>.........<<<<...<<<<<<....>>>>>>.. .>>>>[[..(((((.....<<<<<<<<<<<<<..>>>>.......<.... ..>..)))))......]]...<<<<.<<<<......>>>>>>>>.]].]] ]...}}....]]].<<<....<<<....<<<<<<<.........>>>>>> >>>>......>>>...<<<.<<<<....>>>>....>>>.}}.<<.<<<. .........>>>.>>.<.<<....>>.>...]]]]]].........<<<. ...<<<<...>>>>..>>>......}}.......<<<<<<<<<.<<<... .>>>..>>>>>>.>>>......<<..<...........>..>>....... ..<<<<<((....<.<<<<.....<<..))>>.......>>>>>>>>>>. .)))))).]]]............{{.......{{...[[[.[[....<<< .<<<<<<<..>>>>>>>.>>><<...<<<<.<<<<..>>>>>>>>.>>.. <<<<<<.<.......<<...<.......>.<<<<.......>>>>...>> ......>.>>>..>>>........{.[[.(((((((.....>>>>>>>>> .))))))).]].}....]]....<<<<<<..<...<<<<..<<..<<<<< <<<...<<<......>>>......>>>>>>>>..>>.......<<....> >...>>>>..>..>>>.>>>...]]]...}}......<<<<<<<...<.. .<<<<.<.....>.>>>>...>>>>>>>>..........<<<.<<.<<<. .<.<<<<<<.<<<<<....>>>>>>>>>>>.>..>>>...<<..}}>>.. .>>.....>>>.....<<<......<<<<....>>>>....>>>..]]]] ..<<<<<.<<<<<<<..<<..<<<<<..<<<.<<<<<.......<<.... ....>>..........<<<<<......<<<<<<.......<<.<<<.... ....>>>.>>.....>>>>>>...<<.<<<..<<.<<<<<<....<<<.< <<<<....>>>...<<<......>>>...>>.>>>....<<<...<...< <<<..<<<<<<<<<<<<.......>>>>.>>>>.....>>>>..>>>>.. >.....<<<<<.....>>>>>........>>>....>>>.>>>.....>> >>>>>.......>>>>>....>.>>>>.>>>.....<<.<<<........ <.......<<<.<<<<....>>>>.>>>....>.........>>>.>>.. ....<.....<<<<<..........>>>>>.....>.....>>>>>.... .<<<<<<<<.......>>>>>>>>......>>...>>>>>>>>>>.>>.. ..<..<<.<..<<<<.<<....<<<<<<<<.<<<..<<<<.<<...<<<< <<<<<<<<<<<<<<.....>>>>>>>>>>>>.>.>>>>>...>>.>>>>. .>>>.>>>>>>>>...>>.>>>>...>.>>...>.....<<<<<<<<<.. ..>>>>>>>>>.........

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 7o81 Structural basis of ribosomal frameshifting during translation of the SARS-CoV-2 RNA genome. Resolution 3.1 Å Binding residue (original residue number in PDB) K43 L44 N46 R80 G81 S82 R85 K102 H103 R104 Binding residue (residue number reindexed from 1) K1 L2 N4 R38 G39 S40 R43 K60 H61 R62

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0003735 structural constituent of ribosome

	Biological Process
GO:0006364	rRNA processing
GO:0042274	ribosomal small subunit biogenesis

	Cellular Component
GO:0005634	nucleus
GO:0005730	nucleolus
GO:0005737	cytoplasm
GO:0005840	ribosome
GO:0014069	postsynaptic density
GO:0022626	cytosolic ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:0045202	synapse
GO:1990904	ribonucleoprotein complex

View graph for Molecular Function

View graph for Biological Process

View graph for Cellular Component