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Structure of PDB 4u3m Chain D5 Binding Site BS01

Receptor Information >4u3m Chain D5 (length=70) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] AQHAVILDQEKYDRILKEVPTYRYVSVSVLVDRLKIGGSLARIALRHLEK EGIIKPISKHSKQAIYTRAT

Ligand information >4u3m Chain 2 (length=1750) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] uaucugguugauccugccaguagucauaugcuugucucaaagauuaagcc augcaugucuaaguauaagcaauuuauacagugaaacugcgaauggcuca uuaaaucaguuaucguuuauuugauaguuccuuuacuacaugguauaacu gugguaauucuagagcuaauacaugcuuaaaaucucgacccuuuggaaga gauguauuuauuagauaaaaaaucaaugucuucggacucuuugaugauuc auaauaacuuuucgaaucgcauggccuugugcuggcgaugguucauucaa auuucugcccuaucaacuuucgaugguaggauaguggccuaccaugguuu caacggguaacggggaauaaggguucgauuccggagagggagccugagaa acggcuaccacauccaaggaaggcagcaggcgcgcaaauuacccaauccu aauucagggagguagugacaauaaauaacgauacagggcccauucggguc uuguaauuggaaugaguacaauguaaauaccuuaacgaggaacaauugga gggcaagucuggugccagcagccgcgguaauuccagcuccaauagcguau auuaaaguuguugcaguuaaaaagcucguaguugaacuuugggcccgguu ggccggucggauuuccaacggggccuuuccuucuggcuaaccuugagucc uuguggcucuuggcgaaccaggacuuuuacuuugaaaaaauuagaguguu caaagcaggcguauugcucgaauauauuagcauggaauaauagaauagga cguuugguucuauuuuguugguuucuaggaccaucguaaugauuaauagg gacggucgggggcaucaguauucaauugucagaggugaaauucuuggauu uauugaagacuaacuacugcgaaagcauuugccaaggacguuuucauuaa ucaagaacgaaaguuaggggaucgaagaugaucagauaccgucguagucu uaaccauaaacuaugccgacuagggaucgggugguguuuuuuuaaugacc cacucggcaccuuacgagaaaucaaagucuuuggguucuggggggaguau ggucgcaaggcugaaacuuaaaggaauugacggaagggcaccaccaggag uggagccugcggcuuaauuugacucaacacggggaaacucaccaggucca gacacaauaaggauugacagauugagagcucuuucuugauuuugugggug guggugcauggccguucuuaguugguggagugauuugucugcuuaauugc gauaacgaacgagaccuuaaccuacuaaauaguggugcuagcauuugcug guuauccacuucuuagagggacuaucgguuucaagccgauggaaguuuga ggcaauaacaggucugugaugcccuuagacguucugggccgcacgcgcgc uacacugacggagccagcgagucuaaccuuggccgagaggucuugguaau cuugugaaacuccgucgugcuggggauagagcauuguaauuauugcucuu caacgaggaauuccuaguaagcgcaagucaucagcuugcguugauuacgu cccugcccuuuguacacaccgcccgucgcuaguaccgauugaauggcuua gugaggccucaggaucugggagaauuuggacaaacuuggucauuuagagg aacuaaaagucguaacaagguuuccguaggugaaccugcggaaggaucau ...<<<<<...[[[[>>>>>[[[[.((((((................[[[ .[[[..<<....<<....<<..........>>...>>.>>......{{.. ......[[[..{{..{{....[[[..................<.....<< .<<.......>>.>>......>.........<<<<<..<......>..>> >>>[...((((((......<<<<<<<<<<......>>............. .)))))).....]...<<<<..<<<.....>>>.>>>>....]]]...}} }}..]]].<<<....<<<....<<<<<<<<.......>>>>>>>>>>>.. ....>>>...<<<.<<<<....>>>>....>>>.}}.<<.<<<....... ...>>>.>>.<.<<....>>.>...]]]]]].........<<<....<<< .....>>>..>>>...............<<<<<..<.<..........>. >..>>.>>>......<<..<...........>..>>.........<<<<< ((....<.<<<<.....<<..))>>.......>>>>>>>>>>..)))))) ]]]].........[[[{{.......{{...[[[.[[....<<<<<<.<<< <<....<..>....>>>>>.>>>>>>....<<<<<<.............. .................>>>>>>...<<<<<.<<.......<<...<... ....>..<<<.....>>>....>>......>>.>>..>>>.........[ [...((((((((....>>>>>>>>.))))))))..]].....]]....<< <<<<.<<...<<<<..<<..<<<<<<.<...<<<......>>>......> .>>>>>>..>>.......<<....>>...>>>>...>>>>>.>>>...]] ]...}}......<<<<<<<...<...<<<<.<.....>.>>>>...>>>> >>>>..........<<<.<<.<<<..<<<<<<<<.<<<........>>>> >>>>>>>..>>>...<<..}}>>...>>.....>>>.]]].<<<...... <<<<....>>>>....>>>..]]]]..<<<<<.<<<<<<<..<<.<<<<< <..<<<.<<<<<.......<<........>>..........<<<<<.<.. ..<<<<<........<<.<<<........>>>.>>......>>>>>.<.< <.<<<..<<.<<<<<<....<<<.<<<<<....>>>...<<<......>> >...>>.>>>....<<<<<.<<..<<<<..<<<<<.<<<<<<....>>>> >>...>>>>>..>>>>.>>....<<<<<<.....>>>>>>.......>>> >>....>>>.>>>.....>>>>>>>>....>.>>>>>....>.>>>>.>> >.....<<<<<<<......<<.....<<..<<<<....>>>>..>>.... >>.......>>>>>>>...........<<<<<<..........>>>>>>. .........>>>>>>....<<<<<<<<.......>>>>>>>>......>> ...>>>>>>>>>>.>>....<..<<.<..<<<<.<<....<<<<<<<<.< <<..<.<<......<<...>>......>>.>..>>>.>>>>>>>>...>> .>>>>...>.>>...>.....<<<<<<<<<<..>>>>>>>>>>.......

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 4u3m ? Resolution 3.0 Å Binding residue (original residue number in PDB) G73 S74 R77 H95 S96 Binding residue (residue number reindexed from 1) G38 S39 R42 H60 S61

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0003735 structural constituent of ribosome

	Biological Process
GO:0002181	cytoplasmic translation

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol
GO:0005840	ribosome
GO:0022627	cytosolic small ribosomal subunit
GO:1990904	ribonucleoprotein complex

View graph for Molecular Function

View graph for Biological Process

View graph for Cellular Component