Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

Structure of PDB 6boh Chain JA Binding Site BS01

Receptor Information >6boh Chain JA (length=110) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] PKDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSA SEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSAC TVAVMPELPD

Ligand information >6boh Chain A (length=1507) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] uuggagaguuugauccuggcucagggugaacgcuggcggcgugccuaaga caugcaagucgugcgggccgcgggguuuuacuccguggucagcggcggac gggugaguaacgcgugggugaccuacccggaagagggggacaacccgggg aaacucgggcuaaucccccauguggacccgccccuugggguguguccaaa gggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggugg gguaauggcccaccaaggcgacgacggguagccggucugagaggauggcc ggccacaggggcacugagacacgggccccacuccuacgggaggcagcagu uaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuugga ggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccccg aggaggggacugacgguaccgggguaauagcgccggccaacuccgugcca gcagccgcgguaauacggagggcgcgagcguuacccggauucacugggcg uaaagggcguguaggcggccuggggcgucccaugugaaagaccacggcuc aaccgugggggagcgugggauacgcucaggcuagacggugggagagggug guggaauucccggaguagcggugaaaugcgcagauaccgggaggaacgcc gauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaagc guggggagcaaaccggauuagauacccggguaguccacgcccuaaacgau gcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaagcg cgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugacgg gggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcgaag aaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggggu gccccgcgaggggagcccuagcacaggugcugcauggccgucgucagcuc gugccgugagguguuggguuaagucccgcaacgagcgcaacccccgccgu uaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaagc gggaggaaggaggggacgacgucuggucagcauggcccuuacggccuggg cgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaacgg ggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaaccc gaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgcgg ugaauacguucccgggccuuguacacaccgcccgucacgccaugggagcg ggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguaggg cccgugacuggggcgaagucguaacaagguagcuguaccggaaggugcgg cuggauc .....<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..<..<< <.<<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>.... ..<<.......<<<<<<<<..<<...<<<<<<<.<<<<<....<<<<<.. ....>>>>>.....>>>>>...<<<<<.<<<<<....>>>>>.>>>>>.. <<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<..<<<<<<< <.......>>>>>>>>>>>......>>>..<<<<<<<<....>>>>...> >>>.>>.<<<<<.<.........>>>>>>.<<<<....>>>>...>>>>> >>........<<<....<<<<....>>>>..>>>..>>.>>>>>>..<<< <......<<<<....>>>>.....>>>>....<<<<<........<<<<. ....>>>>..........>>>>>......<<<<<(((...<<<<<..... <<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<<<( (.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<... ..>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<<<< <<....<<<<<<<.<..<<<......>>>.....>.>>>>>>>....... ....<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>....<< <<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>.......... <<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....>>> >>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<<<. <<<<<<<.<<.<<<<<<..<<<<<<<<........<<........>>... .......<<<<<<<.......<<<<.<<...<<<<<......>>>>>... ...............>>.>>>>..<<<.<<<..<<<<<<.......<<<< <<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<<<< <<<..<<<..<<.......>>>>>...>>>>>>>.....<<<<<....>> >>>........>>>>.........>>>...>>>>>>>>>...>>>>>>>. .....>>>>>>>>.....<<<<<<<.....<<<..<<..<<<<....>>> >..>>....>>>.....>>>>>>>.........<.<<<<<<<........ >>>>>>>>.........>>>>>>....<<<<<<<..........>>>>>> >......>>...>>>>>>>>>>.>>.......<<.<.<<<<.<<<..<<< <<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>>>> >>>>>..>>>.>>>>..>.>>.........<<<<<<<<<....>>>>>>> >>.....

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 6boh Conformational Control of Translation Termination on the 70S Ribosome. Resolution 3.4 Å Binding residue (original residue number in PDB) T119 R137 R183 Q193 R195 Binding residue (residue number reindexed from 1) T18 R36 R82 Q92 R94

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0003747 translation release factor activity GO:0005515 protein binding GO:0016149 translation release factor activity, codon specific GO:0043022 ribosome binding

	Biological Process
GO:0006412	translation
GO:0006415	translational termination

	Cellular Component
GO:0005737	cytoplasm
GO:0005829	cytosol

View graph for Molecular Function

View graph for Biological Process

View graph for Cellular Component