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Structure of PDB 1i97 Chain L Binding Site BS01

Receptor Information >1i97 Chain L (length=131) Species: 274 (Thermus thermophilus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVTPKKPNSALRK VAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGV YDAAGVKDRKKSRSKYGTKKPKEAAKTAAKK

Ligand information >1i97 Chain A (length=1514) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] uguuggagaguuugauccuggcucagggugaacgcuggcggcgugccuaa gacaugcaagucgugcgggccgcgggguuuuacuccguggucagcggcgg acgggugaguaacgcgugggugaccuacccggaagagggggacaacccgg ggaaacucgggcuaaucccccauguggacccgccccuuggggugugucca aagggcuuugcccgcuuccggaugggcccgcgucccaucagcuaguuggu gggguaauggcccaccaaggcgacgacggguagccggucugagaggaugg ccggccacaggggcacugagacacgggccccacuccuacgggaggcagca guuaggaaucuuccgcaaugggcgcaagccugacggagcgacgccgcuug gaggaagaagcccuucgggguguaaacuccugaacccgggacgaaacccc cgacgaggggacugacgguaccgggguaauagcgccggccaacuccgugc cagcagccgcgguaauacggagggcgcgagcguuacccggauucacuggg cguaaagggcguguaggcggccuggggcgucccaugugaaagaccacggc ucaaccgugggggagcgugggauacgcucaggcuagacggugggagaggg ugguggaauucccggaguagcggugaaaugcgcagauaccgggaggaacg ccgauggcgaaggcagccaccugguccacccgugacgcugaggcgcgaaa gcguggggagcaaaccggauuagauacccggguaguccacgcccuaaacg augcgcgcuaggucucugggucuccugggggccgaagcuaacgcguuaag cgcgccgccuggggaguacggccgcaaggcugaaacucaaaggaauugac gggggcccgcacaagcgguggagcaugugguuuaauucgaagcaacgcga agaaccuuaccaggccuugacaugcuagggaacccgggugaaagccuggg gugccccgcgaggggagcccuagcacaggugcugcauggccgucgucagc ucgugccgugagguguuggguuaagucccgcaacgagcgcaacccccgcc guuaguugccagcgguucggccgggcacucuaacgggacugcccgcgaaa gcgggaggaaggaggggacgacgucuggucagcauggcccuuacggccug ggcgacacacgugcuacaaugcccacuacaaagcgaugccacccggcaac ggggagcuaaucgcaaaaaggugggcccaguucggauuggggucugcaac ccgaccccaugaagccggaaucgcuaguaaucgcggaucagccaugccgc ggugaauacguucccgggccuuguacacaccgcccgucacgccaugggag cgggcucuacccgaagucgccgggagccuacgggcaggcgccgaggguag ggcccgugacuggggcgaagucguaacaagguagcuguaccggaaggugc ggcuggaucaccuc .......<<<<..[.((((.>>>>.<<<<.<<<<<..<<<<<<<<..... <<<..<<..<<<..<<.<<<<<<<<<<.....>>>>>>>>>>.>>>>>.. ....<<..<....<<<<<<<<..<<...<<<<<<<.<<<<<...<<<<<< <....>>>>>>.>...>>>>>....<<<<.<<<<<....>>>>>.>>>>. ..<<<<...>>>>.>>>>>>>..>>>>>>>>>><<<....<<<...<<<< <<<.......>>>>>>>.>>>......>>>..<<<<<<<<....>>>>.. .>>>>>>>.<<<<<............>>>>>.<<<<....>>>>...>>. >>>.........<<<....<<<<....>>>>..>>>..>>.>>>>>>..< <<<......<<<<....>>>>.....>>>>....<<<<<........<<< <.....>>>>..........>>>>>......<<<<<(((...<<<<<... ..<<.)))>>.......>>>>>>>>>>..>>>>>>>>>..........<< <((.....<<<<...<<<.<<<<<<<.<<<<<<<<<<......<<<<<<. ....>>>>>>....>>>>>>>>..>>>>>>>>>...<<<<<<<<...<<< <<<<.<..<<<<<<<.<(.<<<......>>>.....>)>>>>>>>...>. ......<<....>>.>>>>>>>..>>>>>.>>>...>>>...>>>>.... <<<<<<...<<...<<<<.<.....>.>>>>...>>>>>>>>........ ..<<<<<<..<<<<<<<<<<...>>>>>>>>>>...<<..))>>.....> >>>>>.>>>.<<<......<<<<....>>>>....>>>..)))).]<<<< <.<<<<<<<.....<<<<...<<<<<<<<.<.......<........>.. .........<<<<<<<.......<<<<<<<..<<<<<<<....>>>>>>> ....<<<....>>>...>>>>>>>..<<<.<<<..<<<<<<.......<< <<<<<<<....>>>..<<<<......>>>>..>>>>>>.....<<<<.<< <<<<<...<...<<.......>>.>....>>>>>>>.....<<<<<.... >>>>>........>>>>.........>>>...>>>>>>>>>...>>>>>> >...>..>>>>>>>>.....<<<<<<<.....<<...<<..<<<<....> >>>..>>.....>>.....>>>>>>>...........<<<<<<<...... ..>>>>>>>...........>>>>......<<<<<<..........>>>> >>............>>>>>>>>>>.>>....<..<<.<.<<<<.<<<..< <<<<<<<<<<<<...<.<<<<....<<<....>>>.>>>>.>..>>>>>> >>>>>>>..>>>.>>>>..>.>>...>.....<<<<<<<<<....>>>>> >>>>..........

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 1i97 Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3. Resolution 4.5 Å Binding residue (original residue number in PDB) E16 N49 E73 G87 K123 Binding residue (residue number reindexed from 1) E12 N45 E69 G83 K119

Enzymatic activity Enzyme Commision number ?

Gene Ontology Molecular Function GO:0000049 tRNA binding GO:0003735 structural constituent of ribosome GO:0019843 rRNA binding

	Biological Process
GO:0006412	translation

	Cellular Component
GO:0005840	ribosome
GO:0015935	small ribosomal subunit
GO:1990904	ribonucleoprotein complex

View graph for Molecular Function

View graph for Biological Process

View graph for Cellular Component