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Structure of PDB 7mqa Chain L3 Binding Site BS01

Receptor Information >7mqa Chain L3 (length=115) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure] SLVIPEKFQHILRVLNTNIDGRRKIAFAITAIKGVGRRYAHVVLRKADID LTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQAAAAAAAAAAAAAA AAAAAAAAAAAAAAA

Ligand information >7mqa Chain L1 (length=1636) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure] accugguugauccugccaguagcauaugcuugucucaaagauuaagccau gcaugucuaaguacgcacggccgguacagugaaacugcgaauggcucauu aaaucaguuaugguuccuuuggucgcucgcuccuuacuuggauaacugug guaauucuagagcuaauacaugccgacgggcgcugacccccggggggaug cgugcauuuaucagaucaaaaccaacccgccccucgggcgggcgccggcg gcuuuggugacucuagauaaccucgggccgaucgcacgccccccguggcg gcgacgacccauucgaacgucugcccuaucaacuuucgaugguagucgcc gugccuaccauggugaccacgggugacggggaaucaggguucgauuccgg agagggagccugagaaacggcuaccacauccaaggaaggcagcaggcgcg caaauuacccacucccgacccggggagguagugacgaaaaauaacaauac aggacucuuucgaggcccuguaauuggaaugaguccacuuuaaauccuuu aacgaggauccauuggagggcaagucuggugccagcagccgcgguagcuc caauagcguauauuaaacugcaguuaaaaagcucguaguuggaucuuggg agcgggcgggcgguccagccaccgcccguccccgccccuugccucucggc gccggcccgaagcguuuacuuugaaaaaauuagaguguucaaagcaggcc ccgccuggauaccgcagcuaggaauaauggggaccgcgguucuaggaacu gaggccaugauuaagagggacggccgggggcauucguauugcgccgcuag aggugaaauucuuggaccggcgcaagacggaccagagcgaaagcauuugc caagaauguuuucauuaaucaagaacgaaagucggagguucgaagacgau cagauaccgucguaguuccgaccauaaacgaugccgaccggcgaugcggc ggcguuauucccaugacccgccgggcagcuuccgggaaaccaaagucuuu ggguuccggggggaguaugguugcaaagcugaaacuuaaaggaauugacg gaagggcaccaccaggaguggagccugcggcacccggcccggacacggac aggauugacagauugauagcucuuucucgauuccguggguuggugcaugg ccguucguugguggagcgauuugguuaauuccgauaacgaacgagacucu ggcaugcuagagggacaaguggcguucagccacccgagauugagcaauaa caggucugugaugcccguccggggcacgcgcgcuacacugacuggcucag cguguguacgccggcaggcgcgaaccccauucgugauggggaucggggau uauuccccaugaacgaggaauucccaguaagugcgggucauaagcuugcg uugauuaagucccugcccuuucacaccgcccgucgcuacuaccgauugga ugguuuagugaggcccucggaucggccccgccggggucggcccacggccc uggcggagcgcugagaagacggucgaacuugacuaucuagaggaaguaaa aguuccguaggugaaccugcggaaggaucauuaacg ..<<<<<.......>>>>>.<<.<<<<<<...<.<<.........<<<.< <<..<<....<<....<<..........>>...>>.>>......<<.... ....<<<.<....<<....<<<................<<.....<<.<< .......>>.>>......>>.........<<<<...<<<<..>>>>...> >>><<..<<<<<.....<<..<...<<..<<<<<..>>.>>>....>>.> ..>>...........>>>>>......>>...<<<<.<<<<......>>>> >>>>....>>>...>>..>.>>>.<<<....<<<....<<<<<<<..... ....>>>>>>>>>>......>>>...<<<.<<<<....>>>>....>>>. >>.<<.<<<..........>>>.>>.<.<<....>>.>...>>>>>>... ......<<<....<<<.....>>>..>>>......>>.>.....<<<<<< <<<.<<<....>>>.>.>>>>.>>>>......<<..<...........>. .>>.........<<<<<<.......<<<....>>>............>>> >>>..>>>>>>.>>......<.<((.....<.<<...<<<.<<<<<.<<< .<<<<<<<<<<<<<......>>>>>>>>>..>>>>>>>.<<<...<<<<. <<..>>>>>>.>>>.<<<<<<.<.......<<..<<.......>>.<<<. ..>>>....>>......>.>>>..>>>.>><<.<<.<<<<<<<.>>>>>> >.>>>>...>>>....<<<<<<..<...<<<<..<<..<<<<<<<<...< <<......>>>......>>>>>>>>..>>.......<<....>>...>>> >..>..>>>.>>>...>>>...>>.>....<<<<<<<...<...<<<<.. .......>>>>...>>>>>>>>..........<<<.<<.<<<..<.<<<< <<.<<<........>>>>>>>>>.>..>>>...<<..))>>...>>.... .>>>.>.>......................................<<<< <<<<<<<<..<<..<<<<<..<<<.<<<<<<.<<<<<......<<<<<<. ......<<.<<<........>>>.>>.....>>>>>>....<<<.<<<<< <<<<<.<<<.<<.<<....>>.<<......>>....>>.>>>....<<<. ..<...<..>..>.....<<<<<.....>>>>>........>>>....>> >.>>.>>>>>..>>>...>>>>>>>.>>>>.>>>.....<<.<<<..... ........<<<<....>>>>......>>>.>>......<.....<<<<<. <>.>>>>>.....>.....>>>>>.....<<<<<<<.........>>>>> >>......>>...>>>>>>>.........>>>>>..<<<<.<<..<.<<< <<<<<.<<<..<<<<.<<...<<<<<.<<<<<<<<<<<<.....>>>>>> >>>>>>...>>>>>...>>.>>>>..>>>.>>>>>>>>.>.>>.>>>>.. ..<<<<<<<<<....>>>>>>>>>............

Receptor-Ligand Complex Structure Global view Local view Structure summary [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] [Spin on] [Spin off] [Reset] [High quality] [Low quality] [White background] [Black background] PDB 7mqa Nucleolar maturation of the human small subunit processome. Resolution 2.7 Å Binding residue (original residue number in PDB) F28 K34 G35 V36 G37 R38 Y40 W82 F83 N85 R86 Binding residue (residue number reindexed from 1) F27 K33 G34 V35 G36 R37 Y39 W81 F82 N84 R85

Gene Ontology --> -->

UnboundLocalError

Python 3.6.8: /usr/bin/python3 Thu May 15 02:00:20 2025

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

/var/www/html/BioLiP/pdb.cgi in <module>()

1701     title=pdb2title(pdbid)

1702     if bs.startswith("BS"):

=> 1703         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)

1704     else:

1705         if lig3:

pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '7mqa', asym_id = 'L3', bs = 'BS01', title = 'Nucleolar maturation of the human small subunit processome.'

/var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='7mqa', asym_id='L3', bs='BS01', title='Nucleolar maturation of the human small subunit processome.')

1326         display_ec(ec,csaOrig,csaRenu)

1327     if go:

=> 1328         display_go(go,uniprot,pdbid,asym_id)

1329     return pubmed,uniprot

1330

global display_go = <function display_go>, go = '0003676,0003723,0003735,0005840,0006412', uniprot = '', pdbid = '7mqa', asym_id = 'L3'

/var/www/html/BioLiP/pdb.cgi in display_go(go='0003676,0003723,0003735,0005840,0006412', uniprot='', pdbid='7mqa', asym_id='L3')

484         '''.replace("$namespace_link",namespace_link

485           ).replace("$namespace",namespace

=>  486           ).replace("$uniprot",u

487         ))

488         for l,(term,name) in enumerate(go2aspect[Aspect]):

u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>