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BioLiP

Structure of PDB 6gel Chain A Binding Site BS02

Receptor Information
>6gel Chain A (length=530) Species: 6100,8068 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKL
PVPWPTLVTTLVQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNY
KTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNAIHGNVYITADK
QKNGIKANFGLNCNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSK
LSKDPNEKRDHMVLLEFVTAARMQVADASEEELSECFRIFDFDGNGFIDR
EEFGDIIRLTGEQLTDEDVDEIFGDSDTDKNGRIDFDEFLKMVENVQPIY
PELMGGVQLADHYQQNTPIGDGPVLLPDNHYLSYQSKLSKDPNEKRDHMV
LLEFVTAAGITLGKGEELFTGVVPILVELDGDVNGHKFSVRGEGEGDATN
GKLTLKLICTTGKLPVPWPTLVTTLLMCFARYPDHMKQHDFFKSAMPEGY
VQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLE
YNYNSHNVYITADKQKNGIKANFKIRHNIE
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain6gel Chain A Residue 602 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6gel Dynamic tuning of FRET in a green fluorescent protein biosensor.
Resolution2.51 Å
Binding residue
(original residue number in PDB)
D284 D286 N288 R290 E295
Binding residue
(residue number reindexed from 1)
D277 D279 N281 R283 E288
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0005509 calcium ion binding
GO:0046872 metal ion binding
Biological Process
GO:0006091 generation of precursor metabolites and energy
GO:0008218 bioluminescence
Cellular Component
GO:0005575 cellular_component
GO:0016460 myosin II complex

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:6gel, PDBe:6gel, PDBj:6gel
PDBsum6gel
PubMed31457088
UniProtP42212|GFP_AEQVI Green fluorescent protein (Gene Name=GFP);
W5IDB2

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