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Structure of PDB 6u4p Chain G Binding Site BS02

Receptor Information
>6u4p Chain G (length=293) Species: 1280 (Staphylococcus aureus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ADSDINIKTGTTDIGSNTTVKTGDLVTYDKENGMAKKVFYSFIDDKNHNK
KLLVIRTKGTIAGQYRVYSEEGANKSGLAWPSAFKVQLQLPDNEVAQISD
YYPRNSIDTKEYMSTLTYGFNGNVTGDDTGKIGGLIGANVSIGHTLKYVQ
PDFKTILESPTDKKVGWKVIFNNMVNQNWGPYDRDSWNPVYGNQLFMKTR
NGSMKAADNFLDPNKASSLLSSGFSPDFATVITMDRKASKQQTNIDVIYE
RVRDDYQLHWTSTNWKGTNTKDKWTDRSSERYKIDWEKEEMTN
Ligand information
Ligand IDPQJ
InChIInChI=1S/C19H43NO4P/c1-5-6-7-8-9-10-11-12-13-14-15-16-18-23-25(21,22)24-19-17-20(2,3)4/h5-19H2,1-4H3,(H,21,22)
InChIKeyJOPCRKJIQSCIFM-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CCCCCCCCCCCCCCOP(=O)(O)OCC[N](C)(C)C
CACTVS 3.385CCCCCCCCCCCCCCO[P](O)(=O)OCC[N](C)(C)C
FormulaC19 H43 N O4 P
Namefos-choline-14;
tetradecyl 2-(trimethyl-$l^{4}-azanyl)ethyl hydrogen phosphate
ChEMBL
DrugBank
ZINC
PDB chain6u4p Chain G Residue 402 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6u4p Structure-based discovery of a small-molecule inhibitor of methicillin-resistantStaphylococcus aureusvirulence.
Resolution2.49 Å
Binding residue
(original residue number in PDB)
W179 G180 P181 Y182 N188 Q194
Binding residue
(residue number reindexed from 1)
W179 G180 P181 Y182 N188 Q194
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0042802 identical protein binding
GO:0090729 toxin activity
Biological Process
GO:0001897 symbiont-mediated cytolysis of host cell
GO:0031640 killing of cells of another organism
GO:0035821 modulation of process of another organism
GO:0051715 cytolysis in another organism
Cellular Component
GO:0005576 extracellular region

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Molecular Function

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Cellular Component
External links
PDB RCSB:6u4p, PDBe:6u4p, PDBj:6u4p
PDBsum6u4p
PubMed32179646
UniProtP09616|HLA_STAAU Alpha-hemolysin (Gene Name=hly)

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