Home Research COVID-19 Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●QUARK ●LOMETS ●COACH ●COFACTOR ●MetaGO ●MUSTER ●CEthreader ●SEGMER ●FG-MD ●ModRefiner ●REMO ●DEMO ●SPRING ●COTH ●BSpred ●ANGLOR ●BSP-SLIM ●SAXSTER ●ThreaDom ●ThreaDomEx ●EvoDesign ●GPCR-I-TASSER ●BindProf ●BindProfX ●SSIPe ●ResQ ●IonCom ●STRUM ●DAMpred

●TM-score ●TM-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13

[Back to server]

Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 4)

Search by Pfam ID:

Go to page (83 pages in total): [First page] << < 1 2 3 4 5 6 7 8 9 > >> [Last page] [All entries in one page].

# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
301 PF06516
(NUP)
 click to view
Estimated TM-score=0.79;
easy target.		 >Purine nucleoside permease (NUP) (Length=307)
VKVLLIGMFAQEAAVWTDKLKLDQAIPVPGLSPTYPAVRCNRDDVCQLTTDMGKANAAASVAALVHSGLFDLRQSYFIVA
GVAGVDPAQGTIGTAAWSRYLVDSDLAWEVDARERPAGWSTGYLGIGAKAPGVKPALGYGTEVYRLNEGLLNKALELSRG
VTLADAAEAKAYRAQYPSAPANQPPQVTQCDSLTGNNWFHGDLLGQRARDWVALLTDQQGSYCMSSQEDNATYTALMRGA
EAGLLDAQRVAVLRAASNFDRPHPGQTALASLTANAGGFPLALQNLYRAAHPLVQDIVQHWPDWKGG
302 PF06342
(DUF1057)
 click to view
Estimated TM-score=0.79;
easy target.		 >Alpha/beta hydrolase of unknown function (DUF1057) (Length=291)
TAATVTLKAVYQDTAPYGTDRPITVITMHGSPGSHNDFKYLVPHLAEKGIRVIGINFPGFGHSEDRDTLAHSNEERCAFV
EALLDQLSIRDGLIFLGHSRGAENALMLAAKLKERTVAVALANAPGMRRHKSINYPWIVEHVCALYNNYFFLRPTIEYCM
LKVYNWMGIKCRSGRVVMNSMKSMRSITFGEKKKTFLDTVNETPHIRVIFCYACRDNLIDKEISREYADCFQEQTRLVCA
SKDPDEEELLLKDLNKAVVDNYKSITVEFVPDGHHGQRDRARFWAQSIDKI
303 PF06182
(ABC2_membrane_6)
 click to view
Estimated TM-score=0.79;
easy target.		 >ABC-2 family transporter protein (Length=224)
NLAGSLFGLFLFYRNGYTFSGWSWEAALVVLGIFTLLQGFSATFLAPNLNRIVRHVQEGTLDFVLLKPIRSQFWLSTHTI
SPWGVPDLIFGGVIIGYAGKRLGLGITNYLPSIIPLLCGVIILYSLWFILGATSIWFVKIYNATEVLRGLLEAGRYPMVA
YPAAYRFFFTFIVPVTFLTTVPAEVILGRVEIPWLIGGLVLAVVLFWASSKFWSFALRFYTSAS
304 PF05684
(DUF819)
 click to view
Estimated TM-score=0.79;
trivial target.		 >Protein of unknown function (DUF819) (Length=363)
TALFATGAFGIWSEKTKIGSALSGALVSTLVGLAGSNLGIISCESPAYAVVLEFLLPLAVPLLLFRADLRRVIRSTGTLL
LAFLLGSVATTVGTVVAYWIVPMRSLGQDSWKIAAALMGRHIGGAVNYVAIADALGVSSSVLASGLAADNVICAVYFTTL
FALASKIPAETSTSSNEDGMESGSVSGEKLPVLQLATSLAVSLAICKAGSYVTKLFGIQGGILPAVTAIVVILATAFPTQ
FNGLAPSGEAMALILMQVFFTVVGASGNIWNVVKTAPSIFMFALVQIAVHLVIILGLGKLFRFDQKLLLLASNANVGGPT
TACGMATAKGWSSLVVPGILAGIFGIAIATFLGIGFGVTVLKF
305 PF05653
(Mg_trans_NIPA)
 click to view
Estimated TM-score=0.79;
easy target.		 >Magnesium transporter NIPA (Length=294)
NFYVGLTLAISSSLFIGTSFIFKKRGLLKLAKYQTTRAGDGGYGYLKEWLWWAGMILMILGEFANFAAYAFAPATMVTPL
GALSVLVSAVLSSKFLKEKLNLLGKIGCGLCILGSTVMVLHSPKEQEVESMEKLVEKIKDPVFIVMAIVLLTIAVIFILF
LAPRYGQKTVIVYITICSSLGAFTVMGCKGVGVAIKETFKGRNEFTNWLTWVLLVVVVVCILFQLNYLNRALDTYNTAVV
TPIYYVFFTSFVIFMSVILYKEWGKMSGVDIAGDICGFLTIVVGIFLLQAFKDM
306 PF04681
(Bys1)
 click to view
Estimated TM-score=0.79;
trivial target.		 >Blastomyces yeast-phase-specific protein (Length=155)
ESVVAKRADLGNAFVFIYCNFTVFLDVEAGGVSTRRTLNGRNHDYYHEPYGGGSGDGVSLTLSHTEGRDSSNSRTTFRYK
LSDGNSTVGYSLGNSGGNPFEGHKLTLKPSDDRCPRIEWPDGIPTGVSSGSCGSGANLILTMCPLERPRQEFEDE
307 PF04506
(Rft-1)
 click to view
Estimated TM-score=0.79;
trivial target.		 >Rft protein (Length=554)
KSTKGATFLMLGQLFTKAITFFLNSILVRFLSPRIFGITAFLEFILGTVLFFSREAVRLSTLRIDDNNEDEDEEKQKSNV
LQTLANFAYIPLCIGIPLSIVLTTWQYRNINAYFVTLPFFTWSILLIWCSIIIELLSEPFFIVNQFLLNYSTRSSFESAA
VAIGCIVNFIVVISFENNWIDFSKLASISSVIDDEMLREGVAILAFSLGKFAHSLTLLTCYFYDYLRNFKGQKKSFNIKL
TKIKSRNYIGEHSSSKTINKPYYFQSDILAHFKKVYFQLCFKHLLTEGDKLIINSLCTVEEQGIYSLLSNYGSLVTRLLF
APIEESLRLFLARLLCNSNTNRRNLKLSMDVLINLTKFYLYLSLLIVIFGPVNSSFLLQFVIGSKWSTTSVLDTIRVYCF
YIPFLSLNGIFEAFFQSTATGDQILKHSYFMMVFSGVFLLNCWCLIEYLKLSINGLIIGNIINMILRITYCGRFISKFYK
NLYIDESNSNSFFFNFQNFKVVTLAGIAISIFNWIFIDGYVKNFHQLFINIVLALCLLATILLKERAIIMDLLN
308 PF04481
(DUF561)
 click to view
Estimated TM-score=0.79;
easy target.		 >Protein of unknown function (DUF561) (Length=242)
ISSKISSDFDKQSALKVITGLNNFNIPQIKQMALASEIAKVTYLDIVADTDIIKEVESVSKIPICVSAVKSKELLKCQKT
GVNILEIGNYDCFYEQGRLFHSEEIKLISKETRNLLPHATLCVTLPHILKIEEQVKLASDLQRIGIDMIQTEGKSTSISK
TDHLSGMIQKSASTFSSTYTVSSKIRLPIISASGISSLTSPIAFLYGASGIGIGSNIRRLQDIGSMVIYIYEVQAAISSN
HN
309 PF04443
(LuxE)
 click to view
Estimated TM-score=0.79;
trivial target.		 >Acyl-protein synthetase, LuxE (Length=375)
MPVNNENLTSVLDARPFELSEEQKSPLFKANLLAELVHHYQCNEMYRKFCQKNKFDPLVFDGEVADIPPIPVHIFKAIGH
KLSSVSDDTIKAKLQSSATSGVPSTILLDKVTARRQTRAMARVMQEVLGPKRRPFCIMDIDPTSPNATNLGARIAAVKGY
LNFASTSKYFIDADSPSAPLEFLEQKFVEHLNSLASEEPLIIFGFTFVLYHTVFKTLKDKGISFQLPKGSQVIHIGGWKK
LESEKVDKITFNRDIASVLGISPDDVVDIYGFTEQMGLNYPDCKAGWKHIHAYSDVIIRDESNLEVCGPGKVGLLEFVSP
LPHSYPGNVVLTDDLGVIEESLCECGKAGKRFKVIGRAKKAEVRGCGDVMSEKLT
310 PF04238
(DUF420)
 click to view
Estimated TM-score=0.79;
trivial target.		 >Protein of unknown function (DUF420) (Length=129)
LPPIYAAINGITAVVLVAGVLAIKNGKRKLHEQLMTSAIALSVAFLVMYVAYHMTSESTKFGGEGIIRPIYFFILISHIL
LSIAVIPLVLITYVRALANKFDKHKKIAKITFPIWLYVAVTGVVVYLLI
311 PF04063
(DUF383)
 click to view
Estimated TM-score=0.79;
trivial target.		 >Domain of unknown function (DUF383) (Length=185)
ITDSGIILSDMACMLLSNITKYQDISIKLLKMENQQVEGLSNSTKAIDQLVDVFVRGLDRAYNKEAEYHFLASVFANVTM
LPQGREYFLTNASYDNVTPLSKLIVFTEHPNIIRRGGVISCLKNCCFEIEHHLDMLSPSKVNILPYILLPLCGPEEFDLD
DMEGMPEDIQLLPSDKKREPDAYLR
312 PF04007
(DUF354)
 click to view
Estimated TM-score=0.79;
easy target.		 >Protein of unknown function (DUF354) (Length=340)
LKIWIDITNAPHVRFFRDVITYFQEEGEDVIITARKFGDIHRLMKLFGFEFTSIGKHGVTLSEKLIESTKRAYNLSKFIA
EQRPDVGLSKHSIELPRVTFGLGIPSVYVLDNEHALAANKLTLPLCDNIIMPEVIDLWDIMKTGADPNRIRRYRGTSEII
HFQNFEYNENIFEDLNLKLEREKTILMRPEPSLASYLDADCHESVLTPIVEVLKDYANILIIPRFREQAEIFEGYDNVTI
IKPPVDTFSLMKRCDLVIGAGGTMNREAALLGTPVISCYPGKPLSVDRFYIDNGLMYRSTDVDEIVNTALRLLVSKREQK
KLRTDDLFRIIVDMVYEAAE
313 PF03445
(DUF294)
 click to view
Estimated TM-score=0.79;
trivial target.		 >Putative nucleotidyltransferase DUF294 (Length=140)
KQITNLVGNLLQQGAKASNITRIMTEINDRIVRKIIQFAEREFGPPPVPYCWIALGSEGRKEQTFKTDQDNALIYADPMA
EQEDSVRKYFLEFTNYVKESLLKCGFPPCPGDIMASNPKWCQPFKAWKKYFSQWIYTPKG
314 PF03379
(CcmB)
 click to view
Estimated TM-score=0.79;
easy target.		 >CcmB protein (Length=206)
RLAVRAGGGFGLGLAFFLIVTVLVPFGVGPEASLLSRIAPGVLWIGALLACLLSLDRIFALDWEDGSLDLLATAPLPMEG
IVTIKALAHWITTGLPLVLAAPLLGVLLNLPQAGYLWVLVSLALGTPALSVIGTFGAALTVGLKRGGLLLSLLVLPLYVP
TLIFGAEVARRGAEGLTVQTPLLMLAGISAGTIALLPFASAAVLRI
315 PF03314
(DUF273)
 click to view
Estimated TM-score=0.79;
easy target.		 >Protein of unknown function, DUF273 (Length=217)
VRCYCKIHGYEFVLAVDSDFNCSHKDKFFRRHCAAAKILPLFDAILFLDADIGIVNPNHRIEEYMENDIDVIFYDRFYNW
EIMAGSYIARNTQYAVDLLNEFADYEFKLPKSFHGTDNGALHIFLAEKLFPHASIETDICKKVYAKSNGYEDLFTYEACV
RAIFGAGTDFGKVRIKRKGTGWARDGWLTSMLWHPDIDFMFHGWKLNQLKETPAHGL
316 PF03232
(COQ7)
 click to view
Estimated TM-score=0.79;
easy target.		 >Ubiquinone biosynthesis protein COQ7 (Length=167)
DRFLRVDHAGEVGADRIYAGQMAVLGKTNVGNVIQHMWDQEKEHRKKFDELLPRYRTRPTVLLPIWNVAGFVLGAGSALL
GQKMAMACTAAVETVITDHYNDQIRELMNNPEVNSELLEIISKFRDEEMEHHDTAILHEAEKAPLYQAFSQVVKIGCKGA
IWLSHKI
317 PF03209
(PUCC)
 click to view
Estimated TM-score=0.79;
trivial target.		 >PUCC protein (Length=410)
TLNRVMIVELGVPASIVAVMVALPLLFAPFRALIGFKSDNHQSALGWRRVPYIWKGTLLQFGGFAMMPFALLVLSGGGES
GALPTWVGQLGAAVAFLLVGAGMHTVQTVGLALATDLAEPEARPKVVGLMYVMLLLGTIVSAFFFGWLLADFTPAKLIQV
IQGAALTTMILNVLALWKQESRHPRRGAQRHDDDPSFVEAWRHFVGNGNQVVRRLLTIGLGTAAFTMEDVLLEPYGGQVL
GLTVGDTTKLTATLALGGLFGFGLASKVLSRGMDPFRMACWGALVGIPAFIFVIIAAPMNSPFVFAAGVALIGFGGGLFG
HGTLTATMNLAPPNQAGLALGAWGAVQATAAGLAMALGGILRDLVQAFVTWHPWTHWISIPATGYVFVYLLELVILLAAI
AAMVPLIGRQ
318 PF02007
(MtrH)
 click to view
Estimated TM-score=0.79;
easy target.		 >Tetrahydromethanopterin S-methyltransferase MtrH subunit (Length=305)
REQMVVEIAGRKIGGQPGEYPTALAGTIFYARHKIVEDERKGIFDKAAAEDLINKQAEMEDITGNPALVQVFGGTPEALV
NYIDFVAEVWDGPMLLDSTSGEARMAAAKRATEAGYAKQCIYNSINVSIDEQEYQVLVESDLEASIVLCFDPMDPTVEGK
INVLTNGGKTADKGMLELAEKAGIKYPLIDTAVTPLGNGAGAAVRASFAVKALFGYPVGSGIHNIPSAWDWLREFRKQLR
EAGEKEKAKDIHHVCDIGANLVQVMASGDFVLYGPIDNAYMTFPAVAMVDAIIAEAAKELGIEPV
319 PF00894
(Luteo_coat)
 click to view
Estimated TM-score=0.79;
easy target.		 >Luteovirus coat protein (Length=138)
ETFVFTKDNLVGNSQGSFTFGPSLSDCPAFKDGILKAYHEYKITSILLQFVSEASSTSSGSIAYELDPHCKVSSLQSYVN
KFQITKGGAKTYQARMINGVEWHDSSEDQCRILWKGNGKSSDTAGSFRVTIRVALQNP
320 PF18856
(baeRF_family12)
 click to view
Estimated TM-score=0.78;
easy target.		 >Bacterial archaeo-eukaryotic release factor family 12 (Length=138)
NSMIVVADGAKALFFRNEGDGEHPNLVVERKDEQDNPPDRAQSTDAPGRSFSSVGPGRSAYEETDFHQLEEDRFAANTAE
MLNRRALEGDFESLVIVAPPRTLGELRKHLHKEAEKRIAAEIPKTLTGHPVSEIEKIL
321 PF18479
(PIN_11)
 click to view
Estimated TM-score=0.78;
easy target.		 >PIN like domain (Length=118)
TMTHIVFVDFDNWSNFFGHLPGHLNQGTFIWGFQGGNTNWKPPLNCKIYNYLNRIGCFFLHPRCSKRKDAADFAICMHAG
RLDEQLPKQIPFTILSGDQGFLELENQFKKTQRPAHIL
322 PF18275
(His_Me_b4a2)
 click to view
Estimated TM-score=0.78;
trivial target.		 >His-Me finger endonuclease beta4-alpha2 domain (Length=52)
DIYKTGKGYDKKICNICHILKDTDDFEINQTDAKGRKTTRPSCRECRKNIDG
323 PF17963
(Big_9)
 click to view
Estimated TM-score=0.78;
easy target.		 >Bacterial Ig domain (Length=89)
RVTISVVDVNDPPTASGLAADTKENIPVSFALQCGDPDVGDTVTGRLVSSPPSGSTATLRSGGLSVRYVPKAGFVGTDNF
EYECIDAAG
324 PF17853
(GGDEF_2)
 click to view
Estimated TM-score=0.78;
easy target.		 >GGDEF-like domain (Length=122)
GRSDLGRLAERAERFGLRLAGSYVVAAAKADEPFTDGDRVTRRVESLLLRQLDAREVLVTTKHDLLLCILPGTMPGAPAE
FARHLEIVLGTSRTWQVAVGRAHPGPGGILRSYEEARSALEL
325 PF16794
(fn3_4)
 click to view
Estimated TM-score=0.78;
easy target.		 >Fibronectin-III type domain (Length=101)
PPQKPQLKLARVQSQNGIVLSWSVMEVDRSCATVDSYHLYAYHEDPSATMPSQWKKIGEVKALPLPMACTLTQFVSGSKY
YFAVRAKDIYGRFGPFCDPQS
326 PF16243
(Sm_like)
 click to view
Estimated TM-score=0.78;
easy target.		 >Sm_like domain (Length=85)
IFKLVNGEEVLGKAILTQDETETLVFIQDPVCVQVVTRESEDGKVTRGMGFTKWMQLSEEDFYIIREKDIITVSSMSKEV
IFMYE
327 PF16141
(DUF4849)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Putative glycoside hydrolase Family 18, chitinase_18 (Length=326)
TDVESLQLNTPTFEEQNPQLYADYLKDLNRYKSEEHKVTFVSFENPKGSPGKQAERLTVVPDSVDFICLNNPEVSPEVQA
EMVKIREKGTRTVYSIDYSSIENAWKEKVKAEPELTEEDALQYIGERTNEMLALCDKYNFDGVIADYTGRSLVSLPEAAL
KEYNDRQQKFFGEVMNWQGNHDDKTLVFYGNVQYLVPENMDMLSKFDYIMLKTASSTNADDLALKAYLAIQAGIDAVGGT
EGGVNPVPADRFIVCVELPQADDKDKVKGYWSTVDEKGNKLVAAPGAARWMVEASPNYTRKGIFIMNVHNDYYNNTYGYV
REVIRI
328 PF15971
(Mannosyl_trans4)
 click to view
Estimated TM-score=0.78;
easy target.		 >DolP-mannose mannosyltransferase (Length=163)
GKRYYIDAWDPKPPLTLELATIIAYISNGDPHLQHTLSVVSTIVAGILLTYLISHITSEITGNQFAGLLSGIVFITFPVI
HYSAVFGYEPKYFVFLFGLGSIYLSRNPKPILSGAAAAASAGMWQFAIIFPIISFGIISRRKSKDLILKYVFGATIIAFI
SLL
329 PF15632
(ATPgrasp_Ter)
 click to view
Estimated TM-score=0.78;
easy target.		 >ATP-grasp in the biosynthetic pathway with Ter operon (Length=125)
EFPELMVMEFLEGEEYSIDCLAKSGELIAAVPRRKGGGRIRILENNKELIELAEAFTEEFKLDYIFNIQVKYNQGLPKLL
EINPRMSGGLYFSCLSGVNFPYLAVKLLLGEKVEKQETKLDIKAT
330 PF14871
(GHL6)
 click to view
Estimated TM-score=0.78;
easy target.		 >Hypothetical glycosyl hydrolase 6 (Length=139)
DKEEFAKTLEEAHVDSITCFARCHHGWLYYPSKKFPELIHPGLKNKNFLLEQIEACHKRGIKVPVYTTAQWDGRIMREHP
EWLAVDENGEFIDTQGVPAPHFYHTICLNSGYRQFFKDQLQDMIEVIGVENLDGIFMDI
331 PF14807
(AP4E_app_platf)
 click to view
Estimated TM-score=0.78;
easy target.		 >Adaptin AP4 complex epsilon appendage platform (Length=100)
PLKISTENFGKLWLSFANDVKQNVKVSESQAALSSALKTLQQKLRLHVVEIIGNEGLLACQLLPSIPCLLHFRVHGDVLA
LWFRSSCSSLPDYLLYQCQK
332 PF13778
(DUF4174)
 click to view
Estimated TM-score=0.78;
easy target.		 >Domain of unknown function (DUF4174) (Length=129)
LASFAGKNRVLVITAPHDSDGYYRLMMSLLKPDVYCELAERHVHQIVMFHQEGEMGGKVRRITTEGKVMEEPLDTALIPR
LMSFLKMEKGKFGMVLLKKTLQVEERYPYPVRLEAMYEVIDQSPMRKVE
333 PF13698
(DUF4156)
 click to view
Estimated TM-score=0.78;
easy target.		 >Domain of unknown function (DUF4156) (Length=99)
NSLNYGAEQVRVMTSEPGKECRYLGDITGSQGNFFTGGWTSNSNLETGARNDLKNKAYKMGGNTVVLLTQRAGQTGSSWH
GSGSSKQTNVTLSGNVYRC
334 PF13631
(Cytochrom_B_N_2)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Cytochrome b(N-terminal)/b6/petB (Length=174)
LFIASIGLHMLRIYFTGAFRKPRELNWVIGFILFILAMGEGFTGYSLPDDLLSGNGLRIIDGLIKGIPVVGTWISYLLFG
GEFPGDQVIGRFYTLHILLLPAIIVALIALHLVFVVVHKHTQYPGPGKTNDNVVGYPILPVYAAKAGGFFFIVFGVIALM
AAFFTINPIWNYGP
335 PF13579
(Glyco_trans_4_4)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Glycosyl transferase 4-like domain (Length=172)
GGQNVHVAALARGLARRGHRVEVFTRREDEGSPERVELAPGATVVHVPAGPPTPLPKDELLPYMEEFGRWVRDEWQRTEA
PDVVHAHFWMSGLAALAAGRACDVPVVQTFHALGTVKRRFQGADDTSPPDRLRLERDLAQHVDRIIATCTDEVAELRAMG
VSPDRVRVIPCG
336 PF13536
(EmrE)
 click to view
Estimated TM-score=0.78;
easy target.		 >Putative multidrug resistance efflux transporter (Length=268)
RYIFMVPFLLCIVIIRKNLRPLLNEMRKQPRTWVLWSFVGFGLFYAPLCFASAYSPGWLIAGTWQITIISGALLAPLFFE
TIYTKNGPLQIRGKIPFKGLIMSLIILLGIVLMQIEHAKQLSLESLLLGVVPLLIASFAYPLGNRKMMEVCEGRLDAYQR
VLGMTLASLPFWFLLSLYGFYTVGLPSKGQSFQSLLVALCSGVIATVLFFKATDRVRGNMQKLASVEATQSMEVLFALAG
ELIFLSIPIPSPLSWCGIFIVILGMILH
337 PF13375
(RnfC_N)
 click to view
Estimated TM-score=0.78;
trivial target.		 >RnfC Barrel sandwich hybrid domain (Length=100)
TFKGGVHPFEGKELSKDKPIRELLPKGELVYPLSQHIGAPATPIVAVGDTVLKGQKIAEAGGFVSAPIHASVSGTVKKIE
PRRVPTGDMVNSIVIESDGE
338 PF12857
(TOBE_3)
 click to view
Estimated TM-score=0.78;
easy target.		 >TOBE-like domain (Length=58)
GEGGIAAHVSHILSVGPIVRLELMRNDGKDKELIEVEISRERFRELQLTRGDQVFIKP
339 PF12835
(Integrase_1)
 click to view
Estimated TM-score=0.78;
easy target.		 >Integrase (Length=149)
GLSGASRAGTKFAIPDERFQAVLRSAQQHDRGLTCALQLARLLGLRSQEAVQCASSLKTWEKQLERNQSTLTIVFGTKGG
RPRETRIIDRHAVQQAVKEALLVTKTHNGKLIDKPDLKTAMNFWRSHTTRLGLTGHYSPHSLRYAWAQD
340 PF12806
(Acyl-CoA_dh_C)
 click to view
Estimated TM-score=0.78;
easy target.		 >Acetyl-CoA dehydrogenase C-terminal like (Length=126)
FTKQVHLFCKENAEDEQLKEFIEPLAAMNKEWGELTTKIGMSAMKNREEVGAASVDYLMYSGYITLGYFWAKMAIVARQK
MAEAEGDTSFYQAKLMTAQFYFERLLPRTESLKTTMVAGAESLMQM
341 PF12270
(Cyt_c_ox_IV)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Cytochrome c oxidase subunit IV (Length=130)
MKFEGNIFAIVAVFLAPVTVIYWLLSKEPVGTTALAMTFGLCFLIGFYLLFTARRIDPRPEDDEEAEVSDGAGELGFFSP
HSWWPLYLGGAAALTTMGVVFGWWLVFFTAPLLLLAVIGWVFEYYRGEHA
342 PF12165
(Alfin)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Alfin (Length=125)
VDAIFTNLEGRRLGFIRAFSTDVETLHAASDPEDVNLCLFAYPNGTWEVKEPSSSVPSNLPQPVLGINFSRDGLSRLQWL
TQVSIHSDSWLLSLAYYHGYSLTRDQRNTLFDRINDLPTLHESVV
343 PF11340
(DUF3142)
 click to view
Estimated TM-score=0.78;
easy target.		 >Protein of unknown function (DUF3142) (Length=222)
DGRPLIAVVRLDGQLPSLNQDDILQQVQQLLADWQGQGLTLAGLEIDHDAGSARLPAYAGLLRRLREALPPQLALSITAL
PAWLDSRELPGLLAQVDSSVLQVHAVSDPRRGLFDPHQAEQWARRWAGVSDKPFYLALPAYGVALLPGTAQAPVVESEAP
IARRGQRRELMADPEQLSQLAKTLRNDPPAHLAGLIWFRLPLKGDVRAWSLETLRAVARGDV
344 PF11070
(DUF2871)
 click to view
Estimated TM-score=0.78;
easy target.		 >Protein of unknown function (DUF2871) (Length=133)
MKKILNTSFFYAILAMVAGVFYREFTKFNDFTGKTTLAVMHVHLFVLGVVLLLIMLLLEKQFNLTNNKKFNQFYIVYNIG
LMSTVTMFLIRGITQVRNIEITKAMSSAISGIAGISHITLGTGIIMFFLILKK
345 PF10909
(DUF2682)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Protein of unknown function (DUF2682) (Length=77)
LAVVQDAALDLAAEAQSFLDSGDPAAFPGLESRLTQLLYQTDAVRFGSDQTGLNNLKANVKNCINIFIDLITIKHYT
346 PF10649
(DUF2478)
 click to view
Estimated TM-score=0.78;
easy target.		 >Protein of unknown function (DUF2478) (Length=159)
LAAVLYGPGDDADTLLDDFVQGLQQRGVRVGGIVQRNTRDEVGRKSGMDVIDLTNGDTISICQDLGSGSTACKLDAAGLA
EAGMAVHRAIAAHADLIVINKFSKQEASGSGLRGELADAITSGIPVLTAVPQKCMSDWRDFTGDFGTLLPPSRSAMDAW
347 PF10348
(DUF2427)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Domain of unknown function (DUF2427) (Length=102)
YNTTTFFTVDAPHKAALYLHVILTAIVTVVLYPVCLVLNNVKSSWYLAGLTVNSVVMVIGLMNYFMFMQSAPDLYPGNAY
TKMSWILLFSTCIHWFFALLRA
348 PF10230
(LIDHydrolase)
 click to view
Estimated TM-score=0.78;
easy target.		 >Lipid-droplet associated hydrolase (Length=257)
DVVIVITGNPGVPDFYKDFAEQLQAKLPSEVPIWIIGHTGHTKPPDNLPNSYPDTKSARHLYDLKGNLKHKIEFIKQYVP
ADARIHIIAHSIGSWFTINLLRETEIADRVVKCYLLFPTIERMAESPTGRFLTGIVLRIAAVIIFLSWIFTLLPYLLQAV
LIRVFGLFYGIPAHQTGAVLQLVHPIPLKRIFLLAKDEMILVKELDDNLISQHKGKLFLYYGANDGWTPIRYYEDLKAKF
PDIDAHLCRRGFQHSFV
349 PF10184
(DUF2358)
 click to view
Estimated TM-score=0.78;
easy target.		 >Uncharacterized conserved protein (DUF2358) (Length=112)
RVIQTLKRDLPTLFEKDISYDIYTQDIYFQDPVNKFKGKLNYRIIFWTLRFHAQLFFTKIYFDLHDVNQSAENTILAKWT
VRGVLRVPWKAKIFFNGYSTYKLNKDGLIYEH
350 PF10138
(vWA-TerF-like)
 click to view
Estimated TM-score=0.78;
easy target.		 >vWA found in TerF C terminus (Length=219)
TARVILVLDASGSMSFLYSKGIVADVVERMAAVAAQLDDDGEMQAWTFASHPARLPDLTIGDLPDWLRLHVRVGEVGLFY
RPGKRKKGLRDDQIDMRSVGIQNEEQKVIAQVRAYVRENPTAAPTLVLFFSDGGVYRNTEIERELRDAVEEPIFWQFVGL
GQSNYGVLERFDTLPGRRVDNVGFFAVDDISTVPDPELYDRLLSEFPDWMTAARQAGIL
351 PF10134
(RPA)
 click to view
Estimated TM-score=0.78;
easy target.		 >Replication initiator protein A (Length=228)
KNDLASMEHPLFSLGTRPDRRILTYEHNGAEITVTPSVKGLATIHDKDILIFCVSQLMAALNAGRQVSRTLHLTAHDLLV
ACNRETSGDAYRRLREAFERLAGTRITTNITTGGQEVTSGFGLIDSWEIVRKARGGRMVSVAVTLSDWLYRAVLSKSVLT
LSRDYFRLRKPLERRIYELARKHCGRQDSWQISVETLLKKSGSASPRRVFRKMIRDMIEAQPLPDYEL
352 PF09970
(DUF2204)
 click to view
Estimated TM-score=0.78;
easy target.		 >Nucleotidyl transferase of unknown function (DUF2204) (Length=181)
LNDLSWLFRKLQEHGIKGVVIGSTVIELALRRKSFEDDVDVFALEPSPLIEEDFYRSVAEREDWQVSYTALGTPKFIVKL
PSGEEVIVEFYENIHDFYVPPEILEQAPKKSIGGVEIRVIRPEDYIVLKAKAAREPDIEDLRIIREYIDEGKLKIDERIV
KRDIELLPEEEQGFVVNKLRE
353 PF09562
(RE_LlaMI)
 click to view
Estimated TM-score=0.78;
easy target.		 >LlaMI restriction endonuclease (Length=241)
VRGRKPDTSNINQDHDGKAGHWLEHQMGIKINNKTEADLFGYEMKNQTTSGKITFGDWSADYYIFKDYKYFTSGNTGVNR
DCFMQIFGTYKLDKGRYSWSGEVTPKIKNFNRYGQKLIITENKDITAIYSYDQDSRQNKKDIIPVNMQINDLILARWTSN
SMKKRVESKFNDKGWFKCLQNSLGVYTNIQFGKPITFESWIDLVAEGVVFFDSGMYQGNNRPYSQWRALNNFWDSLIIET
Y
354 PF09431
(DUF2013)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Protein of unknown function (DUF2013) (Length=150)
DETFNYSVIKLIVALNEQFMVASLGNNTVSASLSTPEGNNRVLHVLMRRLWASKTFGENMIFMLNRANRTAEDLCMQLLV
LKILYLLFTTKGTSEYFYTNDLCVLVDVFLRELVDLDEDSESLRHTYLRVLHPLLTKTQLRDMPYKRAQI
355 PF08579
(RPM2)
 click to view
Estimated TM-score=0.78;
easy target.		 >Mitochondrial ribonuclease P subunit (RPM2) (Length=117)
LLKDENAPVWKEDTEPCLNKSTYLQTHIDEINRCYEQKNYNKINSLYQSLKRNDIVPPLEIFTKVLDSLCKRPLDNNDLD
NKMYELLTCYQDMINNRLKPPDEIYNIVLLSLFKGSI
356 PF08551
(DUF1751)
 click to view
Estimated TM-score=0.78;
easy target.		 >Eukaryotic integral membrane protein (DUF1751) (Length=99)
PARTIPFVWNLVTSGYIEQSIFGVVVSTLGLLFIGKLLEPVWGSREFLKFIFVVNFLTSICIFITAIALYYITRKETYLY
MPLSGFHGVLSGFLVGIKQ
357 PF08547
(CIA30)
 click to view
Estimated TM-score=0.78;
easy target.		 >Complex I intermediate-associated protein 30 (CIA30) (Length=174)
WEFRSLEDLDKWTLSSDQEIGGKSQVSLKLGRNNQTALFYGTLNTEVPRDGETRYSGYCTMKSKTPLGAFNRKLHYDWSN
FNTLYLRVRGDGRPWMVNIKSDSYFSQQRDDLYNYFIYTQGGPYWQDIKIPFSKFFLSSRGRIQDNQHPLWTDKITAVGF
TLGDKANGPFQLEI
358 PF08491
(SE)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Squalene epoxidase (Length=273)
APLTIVCDGCFSNLRRALCSPKVDVPSCFVGLVLENCQLPHANHGHVVLANPSPILFYPISSTEVRCLVDVPGQKVPSIA
NGEMAKYLKTVVAPQIPPEIYDSFIAAIDKGSIRTMPNRSMPAAPHPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLR
NLLKPLRNLHDASALCKYLESFYTLRKPVASTINTLAGALYKVFSASPDQARNEMRQACFDYLSLGGVFSNGPIALLSGL
NPRPLSLVAHFFAVAIYGVGRLMLPLPSPKRMW
359 PF07819
(PGAP1)
 click to view
Estimated TM-score=0.78;
easy target.		 >PGAP1-like protein (Length=222)
LTGVPVLFIPGNAGSYKQVRSLGSVALKKAQHLRTPFHFNYFSVDLNEELTGMFGAILSEQTEFVHRCVLKILTMYRKAE
TPPKSVVLVGHSVGGIIARALFTLPDFDLSMVNTIITQATPHQSPVINADQYMADFYRTVNQYWQDGMSSGRLSHVTIAS
TGGAHRDYLVQSGLTSLKRIVPESNAVSAVTSAIPKVWLSTDHLAIVWCKQLVLATKRALFD
360 PF07514
(TraI_2)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Putative helicase (Length=301)
GLLQPESAASLLATPRRQKLLEHIWQRTSLSRKQFAALYRAPLERYAELVQAFPASEAHHHAYPGGMLDHGLEIVAYSLK
LRQSHLLPIGANPEDQAAQAEAWTAAVAYAALLHDIGKIAVDLHVEQADGSTWHPWHGPLHQPYRFRYRDDREYRLHSAA
TGLLYRQLLDLEVLDWLSCYPSLWASLLYVLAGQYEHAGVLGELVVQADRASVAQELGGDPTRAMAAPKHALQRKLLDGL
RYLLKEELKLNQPEASDGWLTEDGLWLVSKTVSDKLRAHLLSQGIDGIPANNTAVFNVLQD
361 PF07398
(MDMPI_C)
 click to view
Estimated TM-score=0.78;
easy target.		 >MDMPI C-terminal domain (Length=96)
ELALDGVEEFLFTVCATPSAWPHKPTAFDFHADEDRSWRLTVDGDGARTTRLPATGEASDTAGASVRGTAGELVLYLYDR
IKADSLHVDGDAGLLD
362 PF07395
(Mig-14)
 click to view
Estimated TM-score=0.78;
easy target.		 >Mig-14 (Length=263)
HPLVVEQLADLAQIPVRYLGWHQAGELKAAIPAWGRHLALSKDVLKRTGKKALFDLGNAEIILPAASDAAAPLRHTMRYL
SELNQGRFSGLKAQKEQLAMARAPEDLSKKFRYNQRRELRLLEEAGGVVRPISDFSAQEIASMYCDLFLRRWGFPATGAE
RMADVLERLRELLIGSVLLLDGKPIAIQLVYRVEAPEWISVEYINGGVDPETKAFSPGSVLSFLNTQAAWEDARSRNKPL
RFSFGRADREYKDRWCNPVPVYQ
363 PF07260
(ANKH)
 click to view
Estimated TM-score=0.78;
easy target.		 >Progressive ankylosis protein (ANKH) (Length=314)
RALNRGIAAVKEDAVEMLASYGLAYSLMKFFTGPMSDFKNVGLVFVNSKRDRTKAVLCMVVAGAIAAVFHTLIAYSDLGY
YIINKLHHVDESVGSKTRRAFLYLAAFPFMDAMAWTHAGILLKHKYSFLVGCASISDVIAQVVFVAILLHSHLECREPLL
IPILSLYMGALVRCTTLCLGYYKNIHDIIPDRSGPELGGDATIRKMLSFWWPLALILATQRISRPIVNLFVSRDLGGSSA
ATEAVAILTATYPVGHMPYGWLTEIRAVYPAFDKNNPSNKVVSTNNTVTSAHIKKFTFVCMALSLTLCFVMFWT
364 PF06888
(Put_Phosphatase)
 click to view
Estimated TM-score=0.78;
easy target.		 >Putative Phosphatase (Length=232)
IVVVFDFDKTIVDVDSDNWVIDELGFTDLFNQLLPTMPWNSLMDRMMMELHSHGKTIEEIEEVLCRIPLHSRVIPAIKAA
HALGCDLRIVSDANMFFIETILKHLGIREYFSEINTNPGYVNEEGRLRILPYHDFNKVSHGCSLCPPNMCKGSIIDRIQD
SISQDDKKRFIYLGDGSGDYCPSLRLKEKDFMMPRKNFPVWDLICKDPLLVKAEIHGWSDGEELEQILLHLI
365 PF06875
(PRF)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Plethodontid receptivity factor PRF (Length=214)
RSTSLLTFLVVSLSTATSLAMAEINDVADLSSDTIVRFSEVQKFAEDIQSSADSLLPTYLSFQGAPLSDPDYQLPHIKVA
NLPTAAMDYDTFMKQTDETRLNNNLYFYSAIVEFLKEAMTEQEDLNPAELSLKAKFEEAMANSNTLISKISDIMTQMGMS
VTITLPKPLVVPFEGSAYFRKKLRGGVVCKEYKERVLLTKRDFEFLAKKYQGHL
366 PF06177
(QueT)
 click to view
Estimated TM-score=0.78;
easy target.		 >QueT transporter (Length=145)
LAQGAMIAAIYVVLTLVFAPFSYGEVQVRISEALTILPLFTPAAIPGLFVGCLISNILGGCVLPDIIFGSLATLIGAIGT
YMLRKQNKFLAPLPPIIANALIVPFVLRYAYQVPLPIPFMMLTVGIGEVISCGVLGMILHTALNK
367 PF05930
(Phage_AlpA)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Prophage CP4-57 regulatory protein (AlpA) (Length=51)
MRILRLKAVIHKTGLTRSTITRLIADDSFPPSRQIGRRSIGWVESDINEWL
368 PF05705
(DUF829)
 click to view
Estimated TM-score=0.78;
easy target.		 >Eukaryotic protein of unknown function (DUF829) (Length=225)
PLVFIFAWLQASEKHLAKYAEFYLDQGFEVLCVHITPWQLVWPVNGSQKVAADVVKFLANNELPEGIVIHGFSVGGYLWG
ECLVKLQADPSGKRVLEKIRGQVWDSLADITEIPVGVPHAVLPHNPTLQGVLRNYINYHMKLFHEEATQYYVKCTRLFHY
EPAPCPALLLVSKTDPVGTEKANNRLRGIWESVGVQTSLKCWDKSPHVGHFHKHRDEYIELLVAH
369 PF05621
(TniB)
 click to view
Estimated TM-score=0.78;
easy target.		 >Bacterial TniB protein (Length=190)
RIERIRAPRWIGYSRTQAILAKLEDLLVWPKSHRMPNMLLVGDTNNGKTMLVQRFRTRHPAHDNPQGQGVRVPVLMIQAP
PVPDEGRFYNAILELLFAPYKPNDRVDKKQAQVIKLLRHVDLRMLVIDEIHHILAGNLNRQRSFLNVIKYLGNELQVPIV
GIGTKDAFRAIQTDPQLANRFEPALLPRWT
370 PF05062
(RICH)
 click to view
Estimated TM-score=0.78;
trivial target.		 >RICH domain (Length=77)
EHRKAAKQVVDKYIEKMLSEIQLDKRKHTQNLAFNIKLSRIQTEYLRKLNVLKEKSEAELPSEIKAKLDAAFEQFKK
371 PF04486
(SchA_CurD)
 click to view
Estimated TM-score=0.78;
easy target.		 >SchA/CurD like domain (Length=119)
MTFAAIMYKVQPGHEEEIAEIFSPANFKRVGTAQVQDQQGEQSGRILGTGLFIQDDTMVRVIQHEGSLADLGAHMGSQRG
VHEAERRLAPFLAAQRDTETSEGFQAHFRNSIMQCVQQR
372 PF04412
(DUF521)
 click to view
Estimated TM-score=0.78;
easy target.		 >Protein of unknown function (DUF521) (Length=402)
MYLTKEEEKMYNGEYGEALETCMNLLVSLGDIYGAEKLVPISSAQVSGVSYKTIGEKGLEFLKDLAEKGVKVSVPTTLNP
AGMDLVRYKELGFPEEFSKKQLEIIECFKKMGVEISCTCTPYLTGNVPVFGSHVAWAESSAVCYVNSVIGARTNREGGPS
ALAAAIVGKTPCYGYHLDENRSPTHIVEVEFETYAKGKTKFEFGLLGSIVGKIVKNGIPYFKFKKAEHIKTDQLKALGAA
LAASGGVALYHVEDVTPEAKKGMPIVQENLERITITEEDIKNEYEILNSTTGAPDLICIGCPHCSLDEIKEVVDFITEQN
AKFKSDLWVCTSIHIKSIADRMGYTEIIENAGGKIVTDTCMVVAPIEDMGYKNVATNSGKAAIYLPNFCKSNVIYGEISE
IL
373 PF04191
(PEMT)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Phospholipid methyltransferase (Length=100)
SIGIGLVLFNLWVKLDAHRVVKDYAWYWGDFFYLIDQELTFDGVFEMAPHPMYSIGYAGYYGISMMAASYEVLFISIVAH
LAQFAFLVIVENPHIEKTYN
374 PF03627
(PapG_N)
 click to view
Estimated TM-score=0.78;
trivial target.		 >PapG carbohydrate binding domain (Length=226)
MKKWFPAFLFLSLSGGNDALAGWHNVMFYAFNDYLTKNAGNVKVIDQPQLYIPWNTGSATATYSSCSGPEFASGVYFQEY
LAWMVVPKHVYTNEGFNIFLDVQSKYGWSMENENDKDFYFFVNGYEWDTWTNNGARICFYPGNMKQLNNKFNDLVFRVLL
PVDLPKGHYNFPVRYIRGIQHHYYDLWRDHYKMPYDQIKQLPATNTLMLSFDNVGGCQPSTQVLNI
375 PF03402
(V1R)
 click to view
Estimated TM-score=0.78;
trivial target.		 >Vomeronasal organ pheromone receptor family, V1R (Length=265)
KLLGENKPKPIDLYIAFLSLTQLMLLITMGLIAVDMFMPWGRWNSTTCQSLIYLHRLLRGLALSATCLLNVLWTITLSSR
SSCLTKFKHKSPHHISGAFLFFYVLYMSFSSHVLVSIIVTPNLTSEDFMYVTQSCSLLPMSYSRESRFSTLMAIRETFLI
SLMALSSGYMVALLWRHKKQAQHLRSTSLSSKASPEQRATRTIMLLTSLFVVLYILERVVFQSRLKFKDCSVFYFVHIIM
SHSYATVSPFVFICTEKHIIKFWES
376 PF02408
(CUB_2)
 click to view
Estimated TM-score=0.78;
easy target.		 >CUB-like domain (Length=117)
AGNVCKTGNVLNRQVNDQPVYWPATWRENQSAPALEAEQSCSWIVTVPSGYYAKLIISGQMNDNISHFQTIDSAGNFVQT
THEGKQPYYFPSPKFTLAMSNEKAATFGFKIVWGKYP
377 PF18800
(Atthog)
 click to view
Estimated TM-score=0.77;
easy target.		 >Attenuator of Hedgehog (Length=133)
XXGETSLGLMWTCTTLYNRPKVCFSPDLTPEWMMALVCIFIGCVCITTTVVLLISSHWDYNVVPYARWVGFAAMVLFCLA
AVIFPLGFSMSEIGGEPYQLPNSFQVGLSYIFFVLALWITVISELFAGKVCLP
378 PF18475
(PIN7)
 click to view
Estimated TM-score=0.77;
easy target.		 >PIN domain (Length=101)
LIDYENVQPKNLEILAHHNFRVYLFVGANQTKLSFELAKAMQELGDKARYIKISGNGPNALDFHIAYYIGEFIKDDPNAY
FHIISKDTGFDPLIRHLKARG
379 PF18201
(PIH1_CS)
 click to view
Estimated TM-score=0.77;
easy target.		 >PIH1 CS-like domain (Length=99)
PTEPRYSVVQRHHVDLQDYRCSRDSAPSTVPHELAVTIELPLLRSAEQAALEVTEKLLCLDSRKPDYRLRLSLPYPVDES
RGKAQFNKARRQLVVTLPV
380 PF18022
(Lectin_C_term)
 click to view
Estimated TM-score=0.77;
trivial target.		 >Ricin-type beta-trefoil lectin C-terminal domain (Length=104)
NTPDKIYWVVDHGLLKSIWYNANLGRGWQYHYVKDKFDFNDLALAFKSEMAKWRNDNVRAEEFGILCGVVFTAPGQQGQN
ENAYNFVLGNNGRGVYFFEPETGR
381 PF17737
(Ig_C19orf38)
 click to view
Estimated TM-score=0.77;
easy target.		 >Ig domain in C19orf38 (HIDE1) (Length=91)
LVPPYPSSQEDPIHISCMAPGDFPGANFTLYRGGQVVQLLQAPANQRGVTFNLSGGSSEAPGGPFHCQYGVIGEHNQPQL
SDLSEPVNISF
382 PF17271
(Usher_TcfC)
 click to view
Estimated TM-score=0.77;
trivial target.		 >TcfC Usher-like barrel domain (Length=433)
DGHMQWFIQAGETADNKVVSSTDDEDSNSTSRKPVVQAGARLPVFAELTATAGVANTDNENYGEAGLQWTHGFTGKVIDG
VLDMQANVFSGTDGSKGNVEQISYNDGFSMSIYRNAAYGKSCTSADAGQYDYADIGCYESVSGTLSVPVKGWSASLGYTY
NKNTSLSPDYSSYDPSKPFEDNMINNTESQSTSKTLQLSLNKSFNWKQMTITTRFGGYRRQSSSASDNDKGIYMGFSLSR
STPKNSQLRSSNSSFSTDYQGSQNGDAQMTYNASQNWDWGSNNDRELGIDVGGTDTDNANASVHGRLNGQYGEGELTISD
SYDNEQKTHQGAVTGSYSSSVAVSKSGFFWGPGGTGSPGAAVAVKVKGKDEDADAADDALVDVSVQGGGATKMKQNSKAL
FPVTGFEEGKVSVDESRDVSNGSQASITQGAGS
383 PF17099
(TrpP)
 click to view
Estimated TM-score=0.77;
easy target.		 >Tryptophan transporter TrpP (Length=172)
NTKLITINALLLAIGVILHQITPVLGLPMQPDFALTMLFIIIILNDNFKITMVSGTLMGIFTAMTTKFPGGQLPNVVDKI
FTAFIVFLFIALIKKSNILGRLSVEKRNNILMAIVLPLGTLVSGILFLGSAKIIVGLPASFSILFLTVVVPSVALNTVIG
LVLYRIVEKSLR
384 PF16994
(Glyco_trans_4_5)
 click to view
Estimated TM-score=0.77;
easy target.		 >Glycosyl-transferase family 4 (Length=171)
WSRRLVLVFHELSMTGAPISMMELATELLSCGATVSAVVLSKKGGLTSELARRRIKVLEDRADLSFKTAMKADLVIAGSA
VCASWIDQYIAHFPAGGSQIAWWIMENRREYFDRSKLVLHRVKMLIFLSELQSKQWLTWCQEENIKLRSQPALVPLAVSD
ELAFVAGIPCS
385 PF15977
(HTH_46)
 click to view
Estimated TM-score=0.77;
easy target.		 >Winged helix-turn-helix DNA binding (Length=68)
SYEQIRATLLSMIDWNEELRSRIGVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINRLPS
386 PF15970
(HicB-like_2)
 click to view
Estimated TM-score=0.77;
trivial target.		 >HicB_like antitoxin of bacterial toxin-antitoxin system (Length=81)
NYPATSHFDEESETYEITYRDFDNIHAVAYTEDDIELEASDILHVGLEEFISSKMPIPMPSEPQSGDFIVYLPPISCLKI
A
387 PF15617
(C-C_Bond_Lyase)
 click to view
Estimated TM-score=0.77;
easy target.		 >C-C_Bond_Lyase of the TIM-Barrel fold (Length=347)
IQYALGATLYMPGTREDIFEIIYKNKYKSMQSMVICLEDAISEKDVEKAEANIIDMCKKLTYYIETKKINPSKLPLIFFR
VRNIEQFEKLLNKKECFIPITGFVFPKFDSTNGEEYLNILDKFNNKRTNVLYGMPILESKRVIYKESRIDELLKIKSILD
KYKKYILNVRIGATDYQGLYSLRRGVDNSIYDIGVVSDCIYDIINIFSRADNEYVISGPVWEYFNSNDQNRVLKPMLRKT
PFMENEGKDGIIKRKHYLEKYVDGLIEEVILDKANGLVGKTVIHPTHIKIVNALYTVTQEEYEDALEILQSNEGGVNKSK
YNNKMNESKPHFNWANKIMKRAYVYGV
388 PF14956
(DUF4505)
 click to view
Estimated TM-score=0.77;
easy target.		 >Domain of unknown function (DUF4505) (Length=177)
QGQSPEPKIREYFYYIDHQGMLFLDDSKMKNFTSCFKEKKFLEFFFKRIRINDTGRYEKEFPYVSPCGRERNYIRCDDTP
IVYTHIIEKSNDDGQYFLSYGHAADLLIRLFEPNKLCMFPESGRVYHPADERVGGVGLVKSSLAIELSKYFSFEAGSDQM
PTHFTWKEEKHRLTQEV
389 PF14657
(Arm-DNA-bind_4)
 click to view
Estimated TM-score=0.77;
easy target.		 >Arm DNA-binding domain (Length=44)
TWYVMARYVNWKGERKQKCKRGFSTKKEAQEWERMFQLQNSSDM
390 PF14558
(TRP_N)
 click to view
Estimated TM-score=0.77;
easy target.		 >ML-like domain (Length=138)
LEAKSLNPCMENSKFTATLFSVVFTPDNRTVTFNINGISSISGNVTAELEVIAYGYTAVRQSLNPCKMNLEGMCPMNTGQ
INLPGNIPDISPDVVNQVPGIAYTVPDLDGTVKIYINSTDTNTPLACVEAQMSNGKTV
391 PF14439
(Bd3614-deam)
 click to view
Estimated TM-score=0.77;
easy target.		 >Bd3614-like deaminase (Length=135)
TQLWERDRGVVAALVSPRGEVTDAARNVNADNKCLHAEWNLLAPTLWGEWVLSPTEDDEIANRPGAGPEEAGPLEEGTRV
LVTLQCCKMCAALVCAAADRPGRRGPIEVVYLNPDDGSLARDTQLRRRGWESRHA
392 PF14398
(ATPgrasp_YheCD)
 click to view
Estimated TM-score=0.77;
easy target.		 >YheC/D like ATP-grasp (Length=253)
ITVINALPRLGKMEIYQLCSQDDTLRQHLPQWAIFQPETAESLLSKFPVAYIKPNNLSKGVGVTKVTHNSNGFLAEQRRG
SENYQHQCVDAGELLNVLSDYLNAPMVIQEAIPLRQYEGNPFDFRLLLQKNDTGQWQQTGIVARVFGKESVISSPRSGGR
VATYDEAMQDLPKSERKRIATSLLNLALKIAQMLEKEFGLFAELGFDLGVDLNGDVWLIEVNGKPLKVSIERLNDKAMTA
AAYERPLEYARYL
393 PF14269
(Arylsulfotran_2)
 click to view
Estimated TM-score=0.77;
trivial target.		 >Arylsulfotransferase (ASST) (Length=303)
QAAKLHGEDVLFSFEGDHNPSYGHGHGHVTLLNNNYETIRELRAGNRKLSDKHEFQILNEKTAVIQIHQPIPYDLGPFGG
TKKQQWIVNSIFQELDIETGEVLFEWSSLDHVSPHETVFSVEDGSVGSGHNSSDAWNYFHINSIDKDSDGNYLLSARICA
SIYKINGKTGEVIWKLGGLPGITSSTITSVGNFTFSFQHHARYLETSEDKSRQLISLFDNSAHGSENKDGKVKLNGISSA
KIIEINTKTWEATLLYNAEAPYNFSVKSQGSAQVLPNKNVLVNWGSLGAVTEYNANEEIVFHA
394 PF14220
(DUF4329)
 click to view
Estimated TM-score=0.77;
easy target.		 >Domain of unknown function (DUF4329) (Length=115)
EFMMGLMEAMNQLSVRFNREVCGFVLVDDAGNFSSTKVSWGGHASCASLPLQQGATVVSSWHTHAAWARQYDNEVPSIQD
VEGDMRMGVNGWVGTPGGRLWFVHGRSGTIRQVCG
395 PF14114
(DUF4286)
 click to view
Estimated TM-score=0.77;
easy target.		 >Domain of unknown function (DUF4286) (Length=97)
LYNVTINIDESVHQQWLQWMQEKHIQDVLATGKFSSARLIKVLVDEEMGGTTYSVQYTTDSKETLQKYYTEDAPRLREEG
LKLFGDKMLAFRTELEV
396 PF13810
(DUF4185)
 click to view
Estimated TM-score=0.77;
trivial target.		 >Domain of unknown function (DUF4185) (Length=307)
SINETAASYQVHGTDLGIIWDNGAGEVLMAFGDTYGEGWGGNGAGPREADWRCNVLARSSDTDLADGMTFDTMVQDRPGH
AKQLLDCKQVNNDEETVIPTAGVTVHGRSYIHYMSVNHWGPPGQWFTNHSGIAYSDDNGETWTKDPDAVWTNTPEWSNKF
QLAAFARHGGHVYMFGTPNGRFGDAHLARVPASRVLDKEAYRYWDGSGWSRDEAAAAPVATGPVGELSVQYNGYAGRWLM
TYLDESRAAIVLRDAPRPTGPWSEEQVIVSGTEYPALYGGFMHPWSSGPDLYFAMTQWAPYNVTLMR
397 PF13704
(Glyco_tranf_2_4)
 click to view
Estimated TM-score=0.77;
easy target.		 >Glycosyl transferase family 2 (Length=106)
KNEGPFIVDWVAHHRAIGVTDFIVYTNDCTDGTDQLLDLLVEKGLVTARYDNPFQPDTPGMSNPQFTAFEDAEKRPEMAQ
MDWLLPMDVDEFIDVKVGDGTLGALM
398 PF13568
(OMP_b-brl_2)
 click to view
Estimated TM-score=0.77;
easy target.		 >Outer membrane protein beta-barrel domain (Length=170)
FAQTTSTSSSPVAFGIKAGMNVSSLSKDEGLDDQKSKIGFNGGVFANIPVASSFSVQPELLYSQYGSKAEYTVLGDKYSS
STNLDYLTVPVMFQYNALPNLYLEAGPEFGFMLSAKNKVKNESTGNSSTTDDFKDDLNTFNFGIGLGAGYYFTPNIGLTA
RYVAGLTDIA
399 PF13287
(Fn3_assoc)
 click to view
Estimated TM-score=0.77;
trivial target.		 >Fn3 associated (Length=58)
GLSCATSDITIYYTTDGSAPSINSTQYTGPFFVNVTRTIRAIAVKADWATSDILTGVY
400 PF13280
(WYL)
 click to view
Estimated TM-score=0.77;
easy target.		 >WYL domain (Length=177)
RLAKVETAIFRNKTITFDYYTMARDETGARKVDPYHLLFQGGQFYLLGHSHERGALRVFRLSRIRGKVAYATKAEHDFKK
PADFDPRTYSNRAEWQYGDVVDTAEVWIGGRIAWQVERHFGRFGEVRPADEGDGAIVFSTPYASDRQLAAWVLRLGEHAR
VLGPPALRDVIDERIEL

Search by Pfam ID:
Go to page (83 pages in total): [First page] << < 1 2 3 4 5 6 7 8 9 > >> [Last page] [All entries in one page].

Bulk download:

[Back to server]

yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218