Search found 157 matches
- Wed Jun 08, 2022 2:16 am
- Forum: Main Forum
- Topic: access the result of the job submitted
- Replies: 2
- Views: 3837
Re: access the result of the job submitted
Which server do you use and what's the jobID? I will check for you.
- Sat May 14, 2022 2:56 am
- Forum: Main Forum
- Topic: using cryo-em structures for modeling and docking
- Replies: 1
- Views: 2520
Re: using cryo-em structures for modeling and docking
You can try to use the following servers which can use cryo-EM density maps to guide the structure modelling and domain assembly:
https://zhanggroup.org/DEMO-EM/
https://zhanggroup.org/CR-I-TASSER/
https://zhanggroup.org/DEMO-EM/
https://zhanggroup.org/CR-I-TASSER/
- Tue May 10, 2022 1:44 am
- Forum: Main Forum
- Topic: QUARK server job QA15513
- Replies: 1
- Views: 2460
Re: QUARK server job QA15513
Sorry! There is an issue of file systems on the EXPANSE cluster. We still need some time to deal with it.
- Thu May 05, 2022 2:59 am
- Forum: Main Forum
- Topic: IonCom job 9264 not completed?
- Replies: 2
- Views: 2672
Re: IonCom job 9264 not completed?
Sorry! The InCom server is not working now. We are trying to repair it.
- Thu May 05, 2022 2:59 am
- Forum: Main Forum
- Topic: IonCom jobs status
- Replies: 1
- Views: 2524
Re: IonCom jobs status
Sorry! The InCom server is not working now. We are trying to repair it.
- Thu May 05, 2022 2:48 am
- Forum: Main Forum
- Topic: Differences in the predictions by I-TASSER web server and standalone package
- Replies: 5
- Views: 7051
Re: Differences in the predictions by I-TASSER web server and standalone package
Thank you! The I-TASSER server uses the standard version rather than the light version.sambitmishra wrote: ↑Mon Apr 25, 2022 4:55 pm Hi there,
Also wanted to ask: Does the I-TASSER webserver set the command line option -light to True when running calculations?
Thanks,
Sambit.
- Thu May 05, 2022 2:39 am
- Forum: Main Forum
- Topic: Differences in the predictions by I-TASSER web server and standalone package
- Replies: 5
- Views: 7051
Re: Differences in the predictions by I-TASSER web server and standalone package
Hello, I'm from the NIH HPC team and Sambit also raised this issue with us. So is there a way around the issue? If we separately obtain HHsearch, can we set it up so that LOMETS uses it? And is there anything else we could set up separately? thanks and regards Afif Hi, Yes! You can search the templ...
- Thu May 05, 2022 1:50 am
- Forum: Main Forum
- Topic: Pending job
- Replies: 1
- Views: 4861
Re: Pending job
Which server did you use? I will check it for you.
- Sat Jan 08, 2022 1:01 am
- Forum: Main Forum
- Topic: COFACTOR Query (Delayed?)
- Replies: 9
- Views: 5834
Re: COFACTOR Query (Delayed?)
Sorry! Our computer cluster is not stable now, while our system admin is still on vacation. We will solve the problem as soon as possible.
- Sat Jan 08, 2022 12:57 am
- Forum: Main Forum
- Topic: COTH Input Query
- Replies: 2
- Views: 2717
Re: COTH Input Query
Sorry! The COTH server currently cannot upload templates. You may try to use I-TASSER to build the monomer models, and then input the HDOCK server (http://hdock.phys.hust.edu.cn/) for docking.