Zhanglab forum

Dear all, the COACH server is currently heavily loaded due to I/O issues. We are working on resolving the issues and apologize for any inconveniences this causes.

We are not maintainer or developer of OpenBabel and are not entitled to assist you with the issue. You should ask your questions at http://openbabel.org/wiki/Help

If you need to download BioLiP dataset, you may want to use https://zhanggroup.org/BioLiP/download.html rather than "browse".

"renumbered to 1" means that we reindex residue numbers (column 23-26 of the PDB atomic coordinate http://www.wwpdb.org/documentation/file-format-content/format33/sect9.html#ATOM) such that the first residue is residue 1, the second residue is residue 2 etc. It is not related to residue nu...

I checked your email sabrina*@uga.edu. Its latest job submission was the job submitted on 2021-12-05 mentioned above. In fact, there is no job submission from @uga.edu on March 14 based on our system record.

The only job submitted on March 13 by you is 13545 S675386-> LEA( 13) m*@student.usm.my 60.49.110.64 Sun Mar 13 09:44:59 EDT 2022 MDAKDGLKEKAGE It was already completed at https://zhanggroup.org/I-TASSER/output/S675386/. In general, you can search your active jobs at https://zhanggroup.org/I-TASSER/...

You should have received an email within 15 minutes after the submission to confirm your job , and another upon job completion. If you did not receive the email, most likely it was sorted into your spam mail box.

I have manually restarted job CH2099407192. If you still cannot get your result next week, please let us know.

The last job you submitted was
MCF9006 s****@uga.edu 2021-12-05 20:50:01.311277 529 TcINO1
which is more than three months ago. We only retain your data ranging from 1 to 3 months due to limited disk space.

6. The default value of -a is F. Whether or not -a is F, TM-align can return result even if Length(Full_length.pdb)<Length(QUERY1.pdb). Therefore, there is not need for you to set it to a non-default value. 7. No, TM-align will not refuse to report an alignment even if the TM-score is very low, unle...