●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

Sequence of Query Gene (Optional, [30,10000] residues in FASTA format) Copy and paste your genetic sequence file here (Sample input) We would suggest you provide Entrez ID for query gene, which helps to find its expression profile and coding proteins. Entrez ID provides unique integer identifiers for genes in National Center for Biotechnology Information. Or upload the sequence file from your local computer Email: (mandatory, where results will be sent to) E-value e1 (optional, default 0.1) The e-value for Blastn software in genetic sequence alignment E-value e2 (optional, default 0.1) The e-value for Blastp sofrware in protein sequence alignment Cut-off value t1 (optional, 0.0-1.0, default 1.0) The templates which have more than t1 seuqnece identity with the query are removed in genetic sequence alignment Cut-off value t2 (optional, 0.0-1.0, default 1.0) The templates which have more than t2 seuqnece identity with the query are removed in protein sequence alignment Job ID: (optional, your given name to your job)

• Download the standalone package for TripletGO.
• Download data libraries, including expression data, genetic sequences, and mapped protein sequences.
• Download benchmark datasets for 8 species, including Human, Mouse, Arabidopsis, Rat, Fly, Budding Yeast, Fission Yeast, and Nematoda

• Yi-Heng Zhu, Chengxin Zhang, Yan Liu, Gilbert S. Omenn, Peter L. Freddolino, Dong-Jun Yu, Yang Zhang. Integrating Transcript Expression Profiles with Protein Homology Inferences for Gene Function Prediction. Genomics Proteomics Bioinformatics. 2022. In Press. [PDF]