RNA Multiple Sequence Alignment
rMSA is a composite approach to generate high quality multiple sequence alignment with large alignment depth and diverse sequence sources by merging sequences from NCBI nucleotide (NT) databases and RNAcentral database. Large-scale benchmark data show that rMSA profiles consistently improves RNA secondary structure and contact prediction.
Online server (view example output)
- Chengxin Zhang, Yang Zhang, Anna Marie Pyle (2022)
rMSA: a sequence search and alignment algorithm to improve RNA structure modeling.