This page contains the decoys of 145 non-homologous
small proteins, together with the models selected by the SPICKER clustering program.
The backbone structures were generated by
the QUARK ab initio modeling; the full-atomic models of the best decoy and the closc model were built by the ModRefiner program.
Explanations:
ID | Native | Length | Decoy_pdb (#) | Decoy_Spicker | Best_decoy (RMSD/TM) | Closc (RMSD/TM) | 3CHBD | native | 103 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (10.00/0.322) | Closc.pdb (13.57/0.244) | 1WN2A | native | 118 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.60/0.411) | Closc.pdb (13.09/0.282) | 1YKUA | native | 132 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  2.80/0.760) | Closc.pdb (  5.25/0.501) | 1WXCB | native | 72 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.44/0.396) | Closc.pdb (11.84/0.285) | 1UFYA | native | 121 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.23/0.415) | Closc.pdb (12.55/0.335) | 2OFCA | native | 141 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.89/0.376) | Closc.pdb (  9.76/0.319) | 2J9WA | native | 101 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  2.82/0.722) | Closc.pdb (  6.06/0.463) | 1T6UA | native | 117 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  2.75/0.800) | Closc.pdb (  4.41/0.612) | 2FCWA | native | 106 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  1.45/0.881) | Closc.pdb (  3.68/0.798) | 2NMLA | native | 100 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  5.57/0.465) | Closc.pdb (11.76/0.276) | 2IP6A | native | 87 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  2.25/0.755) | Closc.pdb (  4.68/0.527) | 1J3WA | native | 134 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.77/0.413) | Closc.pdb (14.08/0.285) | 1NLQA | native | 105 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.14/0.351) | Closc.pdb (  9.25/0.341) | 2CHHA | native | 113 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.82/0.279) | Closc.pdb (10.89/0.324) | 1MN8A | native | 95 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.66/0.403) | Closc.pdb (12.10/0.300) | 2JEKA | native | 140 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.04/0.352) | Closc.pdb (13.78/0.295) | 1N8VA | native | 101 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  5.91/0.543) | Closc.pdb (11.70/0.334) | 1U84A | native | 81 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  1.92/0.788) | Closc.pdb (  3.80/0.539) | 2V33A | native | 91 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.85/0.275) | Closc.pdb (10.72/0.216) | 1W53A | native | 84 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.99/0.677) | Closc.pdb (11.53/0.389) | 1UGIA | native | 83 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.20/0.535) | Closc.pdb (  6.32/0.499) | 1O82A | native | 70 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.08/0.532) | Closc.pdb (  7.45/0.423) | 1OK0A | native | 74 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.10/0.235) | Closc.pdb (12.90/0.181) | 1KA8A | native | 100 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.14/0.334) | Closc.pdb (12.62/0.233) | 2O42A | native | 133 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (13.23/0.272) | Closc.pdb (19.94/0.236) | 1XZQB | native | 117 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.08/0.360) | Closc.pdb (12.61/0.291) | 1V14A | native | 132 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (10.25/0.373) | Closc.pdb (12.43/0.309) | 1OCZE | native | 109 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  3.02/0.698) | Closc.pdb (  4.93/0.520) | 2R41D | native | 102 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.99/0.365) | Closc.pdb (15.65/0.258) | 1IS7K | native | 84 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.36/0.343) | Closc.pdb (12.70/0.225) | 1XPXA | native | 144 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (11.21/0.263) | Closc.pdb (20.11/0.284) | 1MHDA | native | 123 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.83/0.462) | Closc.pdb (10.72/0.261) | 1VASA | native | 137 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.91/0.392) | Closc.pdb (13.47/0.279) | 1JC7A | native | 129 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (10.49/0.265) | Closc.pdb (16.50/0.219) | 2BSEA | native | 107 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.97/0.258) | Closc.pdb (14.07/0.270) | 2FIOB | native | 113 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (10.22/0.296) | Closc.pdb (13.69/0.269) | 1H4LD | native | 147 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.97/0.513) | Closc.pdb (11.56/0.398) | 1CF7B | native | 82 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  5.42/0.591) | Closc.pdb (  6.55/0.497) | 2O26A | native | 144 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.96/0.310) | Closc.pdb (16.90/0.238) | 1HL6D | native | 143 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.90/0.365) | Closc.pdb (14.77/0.283) | 2D5RB | native | 116 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  5.97/0.449) | Closc.pdb (13.81/0.293) | 2J4BB | native | 133 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.60/0.557) | Closc.pdb (17.12/0.359) | 1JSGA | native | 111 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.45/0.392) | Closc.pdb (13.63/0.262) | 2HDIB | native | 103 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.84/0.309) | Closc.pdb (14.59/0.207) | 2BHMA | native | 134 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.28/0.382) | Closc.pdb (14.24/0.309) | 2PT7G | native | 145 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.84/0.359) | Closc.pdb (13.71/0.369) | 2YX8A | native | 79 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.90/0.508) | Closc.pdb (10.31/0.374) | 1CQAA | native | 123 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.61/0.500) | Closc.pdb (  7.70/0.426) | 2GJVA | native | 136 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.79/0.422) | Closc.pdb (18.39/0.251) | 2E79A | native | 108 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.07/0.398) | Closc.pdb (12.00/0.323) | 1QYND | native | 136 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (10.23/0.489) | Closc.pdb (17.88/0.284) | 2GWFB | native | 121 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (10.08/0.271) | Closc.pdb (14.01/0.289) | 1SMPI | native | 100 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.03/0.372) | Closc.pdb (12.17/0.297) | 1E2AA | native | 102 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  1.79/0.838) | Closc.pdb (  2.66/0.767) | 2QVTA | native | 113 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.44/0.245) | Closc.pdb (16.34/0.183) | 2G38C | native | 76 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  5.33/0.493) | Closc.pdb (  8.97/0.494) | 1QC7A | native | 101 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  3.64/0.762) | Closc.pdb (12.55/0.341) | 1B4BA | native | 71 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  2.83/0.645) | Closc.pdb (  7.49/0.337) | 1V1JA | native | 150 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.69/0.350) | Closc.pdb (10.77/0.309) | 2BL7A | native | 77 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  3.48/0.608) | Closc.pdb (10.52/0.287) | 1IM3D | native | 95 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (11.30/0.262) | Closc.pdb (14.25/0.208) | 1BG8A | native | 76 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.82/0.433) | Closc.pdb (12.49/0.240) | 2QYAA | native | 115 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.21/0.413) | Closc.pdb (11.70/0.345) | 1IPIA | native | 114 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.29/0.550) | Closc.pdb (  7.85/0.417) | 1K3BA | native | 119 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (10.01/0.370) | Closc.pdb (14.85/0.303) | 2RCFB | native | 81 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.82/0.327) | Closc.pdb (  9.19/0.266) | 1J1VA | native | 92 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  2.53/0.723) | Closc.pdb (  6.76/0.555) | 1XEQA | native | 89 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.80/0.372) | Closc.pdb (  8.60/0.342) | 2QM2B | native | 112 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.68/0.472) | Closc.pdb (11.41/0.289) | 3BJOA | native | 102 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.58/0.364) | Closc.pdb (12.26/0.275) | 2H5ND | native | 123 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.62/0.362) | Closc.pdb (11.49/0.334) | 1PZWA | native | 80 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.56/0.488) | Closc.pdb (11.30/0.364) | 1R7LB | native | 109 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  5.81/0.462) | Closc.pdb (  7.50/0.402) | 1Y96B | native | 85 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.81/0.369) | Closc.pdb (13.25/0.333) | 2CZVD | native | 119 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.99/0.388) | Closc.pdb (13.41/0.354) | 2B91A | native | 129 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.32/0.337) | Closc.pdb (15.75/0.255) | 1LDDA | native | 74 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  3.07/0.599) | Closc.pdb (10.79/0.353) | 2GYBT | native | 83 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  1.08/0.924) | Closc.pdb (  1.43/0.867) | 2J6ZA | native | 86 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.33/0.645) | Closc.pdb (11.66/0.398) | 1NZEA | native | 112 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  1.80/0.862) | Closc.pdb (  4.16/0.786) | 1Y71B | native | 110 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.36/0.406) | Closc.pdb (10.81/0.337) | 2O4TA | native | 90 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  2.62/0.707) | Closc.pdb (  5.67/0.567) | 2V94B | native | 91 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  3.33/0.612) | Closc.pdb (  4.93/0.468) | 1STMA | native | 141 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (13.07/0.215) | Closc.pdb (16.55/0.203) | 1R75A | native | 110 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.79/0.371) | Closc.pdb (16.13/0.205) | 1MWPA | native | 96 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (10.60/0.285) | Closc.pdb (12.61/0.300) | 1V54H | native | 79 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  3.80/0.586) | Closc.pdb (  6.26/0.532) | 2IGPA | native | 114 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.56/0.493) | Closc.pdb (11.29/0.388) | 2FYGA | native | 128 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (11.46/0.263) | Closc.pdb (14.56/0.251) | 2OQ8A | native | 150 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.56/0.313) | Closc.pdb (13.74/0.276) | 1KVDB | native | 77 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.41/0.376) | Closc.pdb (10.65/0.250) | 1KP6A | native | 79 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.46/0.344) | Closc.pdb (  9.68/0.330) | 1R77B | native | 103 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.98/0.335) | Closc.pdb (11.75/0.313) | 2J97A | native | 98 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.08/0.304) | Closc.pdb (14.99/0.241) | 1KPTA | native | 105 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.80/0.325) | Closc.pdb (13.01/0.261) | 1TSFA | native | 81 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.50/0.362) | Closc.pdb (13.50/0.292) | 2E12A | native | 93 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.25/0.395) | Closc.pdb (14.42/0.256) | 2F5GA | native | 130 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (11.25/0.361) | Closc.pdb (18.02/0.284) | 2HL7A | native | 82 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  3.46/0.648) | Closc.pdb (  7.95/0.421) | 1T1JB | native | 125 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (10.88/0.297) | Closc.pdb (15.63/0.281) | 2OQBB | native | 106 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (11.28/0.314) | Closc.pdb (14.54/0.259) | 1YO3A | native | 85 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.72/0.546) | Closc.pdb (11.04/0.316) | 1DJ7A | native | 109 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.82/0.429) | Closc.pdb (11.93/0.315) | 1VCCA | native | 77 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  3.73/0.576) | Closc.pdb (  5.72/0.386) | 2D68B | native | 77 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  5.38/0.469) | Closc.pdb (10.76/0.411) | 1ZKEA | native | 81 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.17/0.528) | Closc.pdb (  8.32/0.380) | 2CIUA | native | 123 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  5.68/0.628) | Closc.pdb (15.55/0.425) | 3BS1A | native | 103 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.72/0.446) | Closc.pdb (12.89/0.234) | 1G8QA | native | 90 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.88/0.352) | Closc.pdb (  9.04/0.473) | 1RKIA | native | 101 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.46/0.338) | Closc.pdb (  9.81/0.235) | 2AYDA | native | 76 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.60/0.325) | Closc.pdb (10.12/0.303) | 1T92A | native | 108 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.93/0.418) | Closc.pdb (10.05/0.465) | 2Q3TA | native | 121 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.91/0.323) | Closc.pdb (16.25/0.217) | 2CZSA | native | 70 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.26/0.505) | Closc.pdb (  7.61/0.351) | 1JR8A | native | 105 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  5.52/0.506) | Closc.pdb (11.65/0.314) | 1LMIA | native | 131 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.90/0.356) | Closc.pdb (16.73/0.219) | 1DP7P | native | 76 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.27/0.558) | Closc.pdb (13.00/0.407) | 1VYIA | native | 111 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.25/0.404) | Closc.pdb (13.38/0.291) | 1WPUA | native | 147 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.24/0.397) | Closc.pdb (16.00/0.322) | 1XAWA | native | 107 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  2.31/0.795) | Closc.pdb (21.98/0.404) | 1BGFA | native | 124 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (10.10/0.358) | Closc.pdb (15.25/0.269) | 2HEWF | native | 128 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (12.61/0.297) | Closc.pdb (16.43/0.213) | 2OHWA | native | 128 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.11/0.421) | Closc.pdb (11.46/0.363) | 1N13B | native | 112 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.34/0.455) | Closc.pdb (  9.68/0.359) | 1MC2A | native | 122 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.25/0.538) | Closc.pdb (11.20/0.326) | 2B97A | native | 70 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.49/0.353) | Closc.pdb (  9.83/0.306) | 2VB1A | native | 129 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.81/0.292) | Closc.pdb (12.85/0.284) | 1JO0A | native | 97 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  3.17/0.672) | Closc.pdb (11.23/0.356) | 1WCKA | native | 136 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (12.83/0.243) | Closc.pdb (16.60/0.181) | 1IJYA | native | 122 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  6.82/0.477) | Closc.pdb (12.70/0.273) | 1VMHA | native | 129 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.93/0.347) | Closc.pdb (15.58/0.208) | 2QT7A | native | 89 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  3.30/0.626) | Closc.pdb (  6.14/0.460) | 2J6BA | native | 109 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (10.70/0.310) | Closc.pdb (13.79/0.273) | 2QSBA | native | 82 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  2.52/0.696) | Closc.pdb (  3.25/0.601) | 1NQJB | native | 114 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.43/0.295) | Closc.pdb (11.88/0.271) | 2BT9A | native | 90 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  5.98/0.399) | Closc.pdb (10.02/0.308) | 2H8EA | native | 120 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.70/0.325) | Closc.pdb (17.45/0.285) | 1VR7A | native | 119 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  8.58/0.368) | Closc.pdb (11.50/0.314) | 1SAUA | native | 114 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.65/0.536) | Closc.pdb (11.64/0.312) | 1UZ3A | native | 102 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  9.50/0.456) | Closc.pdb (15.16/0.375) | 2AXWA | native | 134 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (15.83/0.232) | Closc.pdb (19.23/0.243) | 1LWBA | native | 122 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  5.47/0.502) | Closc.pdb (12.03/0.293) | 1I27A | native | 73 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  4.91/0.453) | Closc.pdb (  7.46/0.569) | 2AIBA | native | 98 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (  7.48/0.413) | Closc.pdb (10.34/0.286) | 1C5EA | native | 95 | Decoy_pdb (5000) | Decoy_spicker | Best_decoy (11.09/0.223) | Closc.pdb (12.89/0.188) | Average | 107 | (  7.30/0.446) | (11.75/0.341) |
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